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5T2W

Structure of thymine dna glycosylase bound to substrate analog 2'-f-5-formyl-dc

PDB DOI: 10.2210/pdb5t2w/pdb

Classification: HYDROLASE/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2016-08-24
Deposition Author(s): Drohat, A.C. , Pidugu, L.S. , Pozharski, E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.2 Å

5t2w
Literature

Structure of thymine dna glycosylase bound to substrate analog 2'-f-5-formyl-dc

Drohat, A.C. , Pidugu, L.S. , Pozharski, E.

Primary Citation of Related Structures: 5T2W


Proteins
Molecule Chains Sequence Length Organism Sequence
G/T mismatch-specific thymine DNA glycosylase A 227 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SKKSGKSAKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (28-MER) c 28 NA CAGCTCTGTACGTGAGCGATGGACAGCT
DNA (27-MER) d 28 NA AGCTGTCCATCGCTCAXGTACAGAGCTG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-08-24
Deposition Author(s): Drohat, A.C. , Pidugu, L.S. , Pozharski, E.