5OGL
Structure of bacterial oligosaccharyltransferase pglb in complex with an acceptor peptide and an lipid-linked oligosaccharide analog
PDB DOI: 10.2210/pdb5ogl/pdb
Classification: MEMBRANE PROTEIN Organism(s): Ruegeria Pomeroyi Dss-3 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2017-07-13 Deposition Author(s): Aebi, M. , Boilevin, J. , Darbre, T. , Locher, K.P. , Napiorkowska, M. , Reymond, J.-L. , Sovdat, T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Structure of bacterial oligosaccharyltransferase pglb in complex with an acceptor peptide and an lipid-linked oligosaccharide analog
Aebi, M. , Boilevin, J. , Darbre, T. , Locher, K.P. , Napiorkowska, M. , Reymond, J.-L. , Sovdat, T.
Primary Citation of Related Structures: 5OGL
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Undecaprenyl-diphosphooligosaccharide--protein glycotransferase | A | 713 | Ruegeria Pomeroyi Dss-3 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MELQQNFTDNNSIKYTAILILIAFAFSVLARLYWVAWASEFYEFFFNDQLMITTNDGYAFAEGARDMIAGFHQPNDLSYFGSSLSTLTYWLYSILPFSFESIILYMSTFFASLIVVPIILIAREYKLTTYGFIAALLGSIANSYYNRTMSGYYDTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPVFIMIYLWWYPSSYSLNFAMIGLFGLYTLVFHRKEKIFYLTIALMIIALSMLAWQYKLALIVLLFAIFAFKEEKINFYMIWALIFISILILHLSGGLDPVLYQLKFYVFKASDVQNLKDAAFMYFNVNETIMEVNTIDPEVFMQRISSSVLVFILSFIGFILLLKDHKSMLLALPMLALGFMALRAGLRFTIYAVPVMALGFGYFLYAFFNFLEKKQIKLSLRNKNILLILIAFFSISPALMHIYYYKSSTVFTSYEASILNDLKNKAQREDYVVAWWDYGYPIRYYSDVKTLIDGGKHLGKDNFFSSFVLSKEQIPAANMARLSVEYTEKSFKENYPDVLKAMVKDYQKTSAKDFLESLNDPNFKIDTPKTRDVYIYMPYRMLRIMPVVAQFANTNPDNGEQEKSLFFSQANPLDQDKKQGSITLDNGVEISNDYRSLKIEGNSIPLKAFVDIESITNGKFYYNEIDSKAQIYLLYLREYKSYVILDESLYNSSYIQMFLLNQYDQDLFEQITNDTRAKIYRLKRE |
| Substrate mimicking peptide | B | 8 | Ruegeria Pomeroyi Dss-3 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | GDQNATFG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-07-13 Deposition Author(s): Aebi, M. , Boilevin, J. , Darbre, T. , Locher, K.P. , Napiorkowska, M. , Reymond, J.-L. , Sovdat, T.