5NF0
Discovery, crystal structures and atomic force microscopy study of thioether ligated d,l-cyclic antimicrobial peptides against multidrug resistant pseudomonas aeruginosa
PDB DOI: 10.2210/pdb5nf0/pdb
Classification: ANTIMICROBIAL PROTEIN Organism(s): Pseudomonas Aeruginosa , Synthetic Construct
Deposited: 2017-03-13 Deposition Author(s): Darbre, T. , Di Bonaventura, I. , Fu, Y. , He, R. , Hong, W. , Koehler, T. , Luscher, A. , Reymond, J.-L. , Stocker, A. , Van Delden, C. , Visini, R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.271 Å
Discovery, crystal structures and atomic force microscopy study of thioether ligated d,l-cyclic antimicrobial peptides against multidrug resistant pseudomonas aeruginosa
Darbre, T. , Di Bonaventura, I. , Fu, Y. , He, R. , Hong, W. , Koehler, T. , Luscher, A. , Reymond, J.-L. , Stocker, A. , Van Delden, C. , Visini, R.
Primary Citation of Related Structures: 5NF0
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fucose-binding lectin II (PA-IIL) | A | 114 | Pseudomonas Aeruginosa , Synthetic Construct | ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG |
| Fucose-binding lectin II (PA-IIL) | B | 114 | Pseudomonas Aeruginosa , Synthetic Construct | ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG |
| Fucose-binding lectin II (PA-IIL) | C | 114 | Pseudomonas Aeruginosa , Synthetic Construct | ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG |
| Fucose-binding lectin II (PA-IIL) | D | 114 | Pseudomonas Aeruginosa , Synthetic Construct | ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG |
| CYD-TRP-TRD-LYS-LYD-LYS-LYD-LYS-TRD-TRP-CYD-GLY | E | 12 | Pseudomonas Aeruginosa , Synthetic Construct | CWWKKKKKWWCX |
| CYD-TRP-TRD-LYS-LYD-LYS-LYD-LYS-TRD-TRP-CYD-GLY | G | 12 | Pseudomonas Aeruginosa , Synthetic Construct | CWWKKKKKWWCX |
| CYD-TRP-TRD-LYS-LYD-LYS-LYD-LYS-TRD-TRP-CYD-GLY | H | 12 | Pseudomonas Aeruginosa , Synthetic Construct | CWWKKKKKWWCX |
| Fragment of ligand | F | 5 | Pseudomonas Aeruginosa , Synthetic Construct | GGGGG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-03-13 Deposition Author(s): Darbre, T. , Di Bonaventura, I. , Fu, Y. , He, R. , Hong, W. , Koehler, T. , Luscher, A. , Reymond, J.-L. , Stocker, A. , Van Delden, C. , Visini, R.