PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5N7Q

Crystal structure of mature cathepsin d from the tick ixodes ricinus (ircd1) in complex with the inhibitor pepstatin a

PDB DOI: 10.2210/pdb5n7q/pdb

Classification: HYDROLASE
Organism(s): Carboxydothermus Hydrogenoformans (Strain Atcc Baa-161 / Dsm 6008 / Z-2901) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-02-21
Deposition Author(s): Brynda, J. , Hanova, I. , Hobizalova, R. , Mares, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.45 Å

5n7q
Literature

Crystal structure of mature cathepsin d from the tick ixodes ricinus (ircd1) in complex with the inhibitor pepstatin a

Brynda, J. , Hanova, I. , Hobizalova, R. , Mares, M.

Primary Citation of Related Structures: 5N7Q


Proteins
Molecule Chains Sequence Length Organism Sequence
Putative cathepsin d A 339 Carboxydothermus Hydrogenoformans (Strain Atcc Baa-161 / Dsm 6008 / Z-2901) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) IHEGPYPEPLVNLLDVVYYGPISIGTPPQDFQVIFDTGSANLWLPSSKCTTKYCLHHHRYDSSKSSTYEADGRNFTIVYGSGNVEGFISKDVCRIGSAKVSGQPLGEALVVGGESLLEAPFDGILGLAYPSIAVDGVVPVFDNMMKQGLLGEQNVFSVYLNRDPSSKEGGEVLFGGIDHDHYKGSITYVPVTAKGYWQFHVDGVKSVSASKSAPELLCKDGCEAIADTGTSLITGPPEEVDSLNQYLGGTKTEGGQYLLDCDKLESLPNVTFTISGKEFSLRSKDYVLKVNQQGQTLCVSGFMGLEMPQPLWILGDVFLGPYYTIFDRDQDRVGFAEVA
Putative cathepsin d B 339 Carboxydothermus Hydrogenoformans (Strain Atcc Baa-161 / Dsm 6008 / Z-2901) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) IHEGPYPEPLVNLLDVVYYGPISIGTPPQDFQVIFDTGSANLWLPSSKCTTKYCLHHHRYDSSKSSTYEADGRNFTIVYGSGNVEGFISKDVCRIGSAKVSGQPLGEALVVGGESLLEAPFDGILGLAYPSIAVDGVVPVFDNMMKQGLLGEQNVFSVYLNRDPSSKEGGEVLFGGIDHDHYKGSITYVPVTAKGYWQFHVDGVKSVSASKSAPELLCKDGCEAIADTGTSLITGPPEEVDSLNQYLGGTKTEGGQYLLDCDKLESLPNVTFTISGKEFSLRSKDYVLKVNQQGQTLCVSGFMGLEMPQPLWILGDVFLGPYYTIFDRDQDRVGFAEVA
PEPSTATIN A I 6 Carboxydothermus Hydrogenoformans (Strain Atcc Baa-161 / Dsm 6008 / Z-2901) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) XVVXAX
PEPSTATIN A J 6 Carboxydothermus Hydrogenoformans (Strain Atcc Baa-161 / Dsm 6008 / Z-2901) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) XVVXAX
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-02-21
Deposition Author(s): Brynda, J. , Hanova, I. , Hobizalova, R. , Mares, M.