Crystal structure of the pfv gag cbs bound to a mononucleosome
PDB DOI: 10.2210/pdb5mlu/pdb
Classification: DNA BINDING PROTEIN Organism(s): Escherichia Coli , Simian Foamy Virus , Xenopus Laevis
Deposited: 2016-12-07 Deposition Author(s): Cherepanov, P. , Lesbats, P. , Maskell, D.P. , Pye, V.E.
Crystal structure of the pfv gag cbs bound to a mononucleosome
Cherepanov, P. , Lesbats, P. , Maskell, D.P. , Pye, V.E.
Primary Citation of Related Structures: 5MLU
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Histone H3.2 | A | 97 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
Histone H3.2 | E | 97 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
Histone H4 | B | 84 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
Histone H4 | F | 84 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG |
Histone H2A type 1 | C | 105 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK |
Histone H2A type 1 | G | 105 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK |
Histone H2B | D | 93 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | TRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA |
Histone H2B | H | 94 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA |
PFV GAG peptide | M | 17 | Escherichia Coli , Simian Foamy Virus , Xenopus Laevis | GGYNLRPRTYQPQRYGG |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (145-MER) | i | 145 | NA | ATCGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTGAT |
DNA (145-MER) | j | 145 | NA | ATCAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCGAT |
Method: X-RAY DIFFRACTION
Deposited Date: 2016-12-07 Deposition Author(s): Cherepanov, P. , Lesbats, P. , Maskell, D.P. , Pye, V.E.