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5KW9

Structural basis for norovirus neutralization by a hbga blocking human iga antibody

PDB DOI: 10.2210/pdb5kw9/pdb

Classification: ANTIVIRAL PROTEIN
Organism(s): Homo Sapiens , Norwalk Virus

Deposited: 2016-07-15
Deposition Author(s): Prasad, B.V.V. , Shanker, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

5kw9
Literature

Structural basis for norovirus neutralization by a hbga blocking human iga antibody

Prasad, B.V.V. , Shanker, S.

Primary Citation of Related Structures: 5KW9


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein VP1 A 295 Homo Sapiens , Norwalk Virus EQKTRPFTLPNLPLSSLSNSRAPLPISSMGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVDLWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASSGPQQLPINGVFVFVSWVSRFYQLKPVGTA
IgA(VH)-IgG(CH) heavy chain Fab fragment H 227 Homo Sapiens , Norwalk Virus QVQLVQSGAEVKKPGSSVKVSCRTSGDTFNTHAISWVRQAPGQGLEWMGGIIPIFATTNYANKFQGTVTISADESTSTAYLEVRSLRSEDTAVYYCASNRANRADDYDYYFDYWGQGTLVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
IgA Light chain L 220 Homo Sapiens , Norwalk Virus EIVMSQSPDSLAVSLGERATINCKSSQSVLYKSDKKNYLAWYQQKSGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSIPRTFGQGTKVDIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHEGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-07-15
Deposition Author(s): Prasad, B.V.V. , Shanker, S.