Structural basis for norovirus neutralization by a hbga blocking human iga antibody
PDB DOI: 10.2210/pdb5kw9/pdb
Classification: ANTIVIRAL PROTEIN Organism(s): Homo Sapiens , Norwalk Virus
Deposited: 2016-07-15 Deposition Author(s): Prasad, B.V.V. , Shanker, S.
Structural basis for norovirus neutralization by a hbga blocking human iga antibody
Primary Citation of Related Structures: 5KW9
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Capsid protein VP1 | A | 295 | Homo Sapiens , Norwalk Virus | EQKTRPFTLPNLPLSSLSNSRAPLPISSMGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVDLWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGASSGPQQLPINGVFVFVSWVSRFYQLKPVGTA |
IgA(VH)-IgG(CH) heavy chain Fab fragment | H | 227 | Homo Sapiens , Norwalk Virus | QVQLVQSGAEVKKPGSSVKVSCRTSGDTFNTHAISWVRQAPGQGLEWMGGIIPIFATTNYANKFQGTVTISADESTSTAYLEVRSLRSEDTAVYYCASNRANRADDYDYYFDYWGQGTLVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC |
IgA Light chain | L | 220 | Homo Sapiens , Norwalk Virus | EIVMSQSPDSLAVSLGERATINCKSSQSVLYKSDKKNYLAWYQQKSGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSIPRTFGQGTKVDIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHEGLSSPVTKSFNRGEC |
Method: X-RAY DIFFRACTION
Deposited Date: 2016-07-15 Deposition Author(s): Prasad, B.V.V. , Shanker, S.