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5KSB

T15-dq8.5-glia-gamma1 complex

PDB DOI: 10.2210/pdb5ksb/pdb

Classification: IMMUNE SYSTEM
Organism(s): Salmonella Enterica , Exiguobacterium Sp. Kkbo11

Deposited: 2016-07-08
Deposition Author(s): Petersen, J. , Reid, H.H. , Rossjohn, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

5ksb
Literature

T15-dq8.5-glia-gamma1 complex

Petersen, J. , Reid, H.H. , Rossjohn, J.

Primary Citation of Related Structures: 5KSB


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class II histocompatibility antigen, DQ alpha 1 chain A 191 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWSLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPETSGDDDDK
HLA class II histocompatibility antigen, DQ alpha 1 chain C 191 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWSLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPETSGDDDDK
HLA class II histocompatibility antigen, DQ beta 1 chain B 225 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 QPQQSFPEQEGSGGSIEGRGGSGASRDSPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQSTGGDDDDK
HLA class II histocompatibility antigen, DQ beta 1 chain D 225 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 QPQQSFPEQEGSGGSIEGRGGSGASRDSPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVTPLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQNPIIVEWRAQSTGGDDDDK
T15 TCR alpha TRAV20*02 E 206 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 MEDQVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKERLKATLTKKESFLHITAPKPEDSATYLCAVQASGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T15 TCR alpha TRAV20*02 G 206 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 MEDQVTQSPEALRLQEGESSSLNCSYTVSGLRGLFWYRQDPGKGPEFLFTLYSAGEEKEKERLKATLTKKESFLHITAPKPEDSATYLCAVQASGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS
T15 TCR beta TRBV9*01 F 243 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 MGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSNRGLGTDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T15 TCR beta TRBV9*01 H 243 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 MGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSNRGLGTDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
DQ8.5-glia-gamma1 peptide I 11 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 GPQQSFPEQEA
DQ8.5-glia-gamma1 peptide J 11 Salmonella Enterica , Exiguobacterium Sp. Kkbo11 GPQQSFPEQEA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-07-08
Deposition Author(s): Petersen, J. , Reid, H.H. , Rossjohn, J.