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FASTA Sequence PDB Format mmCIF Format
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5K78

Dbr1 in complex with 16-mer branched rna

PDB DOI: 10.2210/pdb5k78/pdb

Classification: HYDROLASE/RNA
Organism(s): Entamoeba Histolytica , Synthetic Construct

Deposited: 2016-05-25
Deposition Author(s): Clark, N.E. , Hart, P.J. , Taylor, A.B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.64 Å

5k78
Literature

Dbr1 in complex with 16-mer branched rna

Clark, N.E. , Hart, P.J. , Taylor, A.B.

Primary Citation of Related Structures: 5K78


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA lariat debranching enzyme, putative A 360 Entamoeba Histolytica , Synthetic Construct MATEQIQHIAIVGCVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNAESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNINHHHHHH
RNA lariat debranching enzyme, putative B 360 Entamoeba Histolytica , Synthetic Construct MATEQIQHIAIVGCVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNAESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNINHHHHHH
RNA lariat debranching enzyme, putative C 360 Entamoeba Histolytica , Synthetic Construct MATEQIQHIAIVGCVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNAESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNINHHHHHH
RNA lariat debranching enzyme, putative D 360 Entamoeba Histolytica , Synthetic Construct MATEQIQHIAIVGCVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNAESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNINHHHHHH
RNA lariat debranching enzyme, putative E 360 Entamoeba Histolytica , Synthetic Construct MATEQIQHIAIVGCVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNAESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNINHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
branch 2 of branched RNA 5'-UACUAA(2'-GUAUGU)CAAGU-3' x 6 NA GUAUGU
branch 2 of branched RNA 5'-UACUAA(2'-GUAUGU)CAAGU-3' y 6 NA GUAUGU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-05-25
Deposition Author(s): Clark, N.E. , Hart, P.J. , Taylor, A.B.