5JVT
Crystal structure of the dna binding domain of transcription factor fli1 in complex with an 11-mer dna gaccggaagtg
PDB DOI: 10.2210/pdb5jvt/pdb
Classification: transcription/dna
Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2016-05-11
Deposition Author(s): Hou, C. , Tsodikov, O.V.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Crystal structure of the dna binding domain of transcription factor fli1 in complex with an 11-mer dna gaccggaagtg
Primary Citation of Related Structures: 5JVT
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Friend leukemia integration 1 transcription factor | A | 104 | Homo Sapiens , Synthetic Construct | GPHMPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTE |
| Friend leukemia integration 1 transcription factor | D | 104 | Homo Sapiens , Synthetic Construct | GPHMPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTE |
| Friend leukemia integration 1 transcription factor | G | 104 | Homo Sapiens , Synthetic Construct | GPHMPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTE |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3') | b | 11 | NA | GACCGGAAGTG |
| DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3') | e | 11 | NA | GACCGGAAGTG |
| DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*G)-3') | h | 11 | NA | GACCGGAAGTG |
| DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3') | c | 11 | NA | CACTTCCGGTC |
| DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3') | f | 11 | NA | CACTTCCGGTC |
| DNA (5'-D(*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3') | i | 11 | NA | CACTTCCGGTC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-05-11
Deposition Author(s): Hou, C. , Tsodikov, O.V.