5JGH
Crystal structure of the mitochondrial dna packaging protein abf2p in complex with dna at 2.6 angstrom resolution
PDB DOI: 10.2210/pdb5jgh/pdb
Classification: DNA BINDING PROTEIN Organism(s): Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct
Deposited: 2016-04-20 Deposition Author(s): Chakraborty, A. , Lyonnais, S. , Sola, M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.6 Å
Crystal structure of the mitochondrial dna packaging protein abf2p in complex with dna at 2.6 angstrom resolution
Chakraborty, A. , Lyonnais, S. , Sola, M.
Primary Citation of Related Structures: 5JGH
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| ARS-binding factor 2, mitochondrial | A | 163 | Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct | HHHHHHKASKRTQLRNELIKQGPKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEYNARYPLN |
| ARS-binding factor 2, mitochondrial | D | 163 | Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct | HHHHHHKASKRTQLRNELIKQGPKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEYNARYPLN |
| ARS-binding factor 2, mitochondrial | G | 163 | Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct | HHHHHHKASKRTQLRNELIKQGPKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEYNARYPLN |
| ARS-binding factor 2, mitochondrial | J | 163 | Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Synthetic Construct | HHHHHHKASKRTQLRNELIKQGPKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEYNARYPLN |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*TP*TP*TP*AP*TP*TP*AP*TP*TP*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*A)-3') | b | 22 | NA | TTTATTATTTTATATTATATAA |
| DNA (5'-D(*TP*TP*TP*AP*TP*TP*AP*TP*TP*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*A)-3') | e | 22 | NA | TTTATTATTTTATATTATATAA |
| DNA (5'-D(*TP*TP*TP*AP*TP*TP*AP*TP*TP*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*A)-3') | h | 22 | NA | TTTATTATTTTATATTATATAA |
| DNA (5'-D(*TP*TP*TP*AP*TP*TP*AP*TP*TP*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*A)-3') | k | 22 | NA | TTTATTATTTTATATTATATAA |
| DNA (5'-D(*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*AP*AP*AP*TP*AP*AP*TP*AP*AP*A)-3') | c | 22 | NA | TTATATAATATAAAATAATAAA |
| DNA (5'-D(*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*AP*AP*AP*TP*AP*AP*TP*AP*AP*A)-3') | f | 22 | NA | TTATATAATATAAAATAATAAA |
| DNA (5'-D(*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*AP*AP*AP*TP*AP*AP*TP*AP*AP*A)-3') | i | 22 | NA | TTATATAATATAAAATAATAAA |
| DNA (5'-D(*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*AP*AP*AP*TP*AP*AP*TP*AP*AP*A)-3') | l | 22 | NA | TTATATAATATAAAATAATAAA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-04-20 Deposition Author(s): Chakraborty, A. , Lyonnais, S. , Sola, M.