Crystal structure of chicken mda5 with 5'p 10-mer dsrna and adp-mg2+ at 2.6 a resolution (monoclinic form, twinned).
PDB DOI: 10.2210/pdb5jc3/pdb
Classification: IMMUNE SYSTEM Organism(s): Gallus Gallus , Synthetic Construct
Deposited: 2016-04-14 Deposition Author(s): Cusack, S. , Uchikawa, E.
Crystal structure of chicken mda5 with 5'p 10-mer dsrna and adp-mg2+ at 2.6 a resolution (monoclinic form, twinned).
Primary Citation of Related Structures: 5JC3
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Melanoma differentiation associated protein-5 | A | 701 | Gallus Gallus , Synthetic Construct | GAMGDLTLRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPLVEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEEDESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKENKPLIPQPQILGLTASPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDPFRERIIEIMQDIQKYCQLYPKSEFGSQPYEQWVIREERRAAKEEKRKERVCAEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDEEPLVSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRKTYKKNPSLITFLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENRTLQDKHADYQTNVEIICKDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDKKTTKEIFKKWGELPIIFPDFDYASH |
Melanoma differentiation associated protein-5 | B | 701 | Gallus Gallus , Synthetic Construct | GAMGDLTLRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPLVEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEEDESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKENKPLIPQPQILGLTASPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDPFRERIIEIMQDIQKYCQLYPKSEFGSQPYEQWVIREERRAAKEEKRKERVCAEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDEEPLVSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRKTYKKNPSLITFLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENRTLQDKHADYQTNVEIICKDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDKKTTKEIFKKWGELPIIFPDFDYASH |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
RNA (5'-R(P*GP*GP*UP*AP*CP*GP*UP*AP*CP*C)-3') | x | 10 | NA | GGUACGUACC |
RNA (5'-R(P*GP*GP*UP*AP*CP*GP*UP*AP*CP*C)-3') | y | 10 | NA | GGUACGUACC |
RNA (5'-R(P*GP*GP*UP*AP*CP*GP*UP*AP*CP*C)-3') | c | 10 | NA | GGUACGUACC |
RNA (5'-R(P*GP*GP*UP*AP*CP*GP*UP*AP*CP*C)-3') | d | 10 | NA | GGUACGUACC |
Method: X-RAY DIFFRACTION
Deposited Date: 2016-04-14 Deposition Author(s): Cusack, S. , Uchikawa, E.