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FASTA Sequence PDB Format mmCIF Format
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5J37

Crystal structure of 60-mer bfdv capsid protein in complex with single stranded dna

PDB DOI: 10.2210/pdb5j37/pdb

Classification: VIRUS/DNA
Organism(s): Beak And Feather Disease Virus , Synthetic Construct

Deposited: 2016-03-30
Deposition Author(s): Aragao, D. , Forwood, J.K. , Raidal, S. , Sarker, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.3 Å

5j37
Literature

Crystal structure of 60-mer bfdv capsid protein in complex with single stranded dna

Aragao, D. , Forwood, J.K. , Raidal, S. , Sarker, S.

Primary Citation of Related Structures: 5J37


Proteins
Molecule Chains Sequence Length Organism Sequence
Beak and feather disease virus capsid protein E 257 Beak And Feather Disease Virus , Synthetic Construct MHHHHHHSSGVDLGTENLYFQSNARRRYARPYRRRHIRRYRRRRRHFRRRRFSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFALDDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDGFGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRGFKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGGPNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFAPNNPST
Beak and feather disease virus capsid protein A 257 Beak And Feather Disease Virus , Synthetic Construct MHHHHHHSSGVDLGTENLYFQSNARRRYARPYRRRHIRRYRRRRRHFRRRRFSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFALDDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDGFGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRGFKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGGPNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFAPNNPST
Beak and feather disease virus capsid protein B 257 Beak And Feather Disease Virus , Synthetic Construct MHHHHHHSSGVDLGTENLYFQSNARRRYARPYRRRHIRRYRRRRRHFRRRRFSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFALDDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDGFGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRGFKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGGPNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFAPNNPST
Beak and feather disease virus capsid protein C 257 Beak And Feather Disease Virus , Synthetic Construct MHHHHHHSSGVDLGTENLYFQSNARRRYARPYRRRHIRRYRRRRRHFRRRRFSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFALDDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDGFGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRGFKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGGPNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFAPNNPST
Beak and feather disease virus capsid protein D 257 Beak And Feather Disease Virus , Synthetic Construct MHHHHHHSSGVDLGTENLYFQSNARRRYARPYRRRHIRRYRRRRRHFRRRRFSTNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFALDDFLQAVPNPHTLNFEDYRIKLAKMEMRPTGGHYTVQSDGFGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSRGFKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGGPNSAGTKVRHYGIAFSFPQPEQTITYVTKLTLYVQFRQFAPNNPST

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
single stranded DNA f 30 NA CGCGGTGACCGTCTCTCGCCACAATGCCCA
single stranded DNA g 30 NA CGCGGTGACCGTCTCTCGCCACAATGCCCA
single stranded DNA h 30 NA CGCGGTGACCGTCTCTCGCCACAATGCCCA
single stranded DNA i 30 NA CGCGGTGACCGTCTCTCGCCACAATGCCCA
single stranded DNA j 30 NA CGCGGTGACCGTCTCTCGCCACAATGCCCA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-03-30
Deposition Author(s): Aragao, D. , Forwood, J.K. , Raidal, S. , Sarker, S.