5IY5
Electron transfer complex of cytochrome c and cytochrome c oxidase at 2.0 angstrom resolution
PDB DOI: 10.2210/pdb5iy5/pdb
Classification: OXIDOREDUCTASE Organism(s): Bos Taurus , Equus Caballus
Deposited: 2016-03-24 Deposition Author(s): Aoe, S. , Baba, J. , Shimada, A. , Shimada, S. , Tsukihara, T. , Yamashita, E.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2 Å
Electron transfer complex of cytochrome c and cytochrome c oxidase at 2.0 angstrom resolution
Aoe, S. , Baba, J. , Shimada, A. , Shimada, S. , Tsukihara, T. , Yamashita, E.
Primary Citation of Related Structures: 5IY5
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Cytochrome c oxidase subunit 1 | A | 514 | Bos Taurus , Equus Caballus | MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK |
| Cytochrome c oxidase subunit 1 | N | 514 | Bos Taurus , Equus Caballus | MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK |
| Cytochrome c oxidase subunit 7A1, mitochondrial | J | 58 | Bos Taurus , Equus Caballus | FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPHK |
| Cytochrome c oxidase subunit 7A1, mitochondrial | W | 58 | Bos Taurus , Equus Caballus | FENRVAEKQKLFQEDNGLPVHLKGGATDNILYRVTMTLCLGGTLYSLYCLGWASFPHK |
| Cytochrome c oxidase subunit 7B, mitochondrial | K | 49 | Bos Taurus , Equus Caballus | APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR |
| Cytochrome c oxidase subunit 7B, mitochondrial | X | 49 | Bos Taurus , Equus Caballus | APDFHDKYGNAVLASGATFCVAVWVYMATQIGIEWNPSPVGRVTPKEWR |
| Cytochrome c oxidase subunit 7C, mitochondrial | L | 46 | Bos Taurus , Equus Caballus | HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK |
| Cytochrome c oxidase subunit 7C, mitochondrial | Y | 46 | Bos Taurus , Equus Caballus | HYEEGPGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK |
| Cytochrome c oxidase subunit 8B, mitochondrial | M | 43 | Bos Taurus , Equus Caballus | ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS |
| Cytochrome c oxidase subunit 8B, mitochondrial | Z | 43 | Bos Taurus , Equus Caballus | ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS |
| Cytochrome c | 1 | 105 | Bos Taurus , Equus Caballus | XGDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE |
| Cytochrome c | 2 | 105 | Bos Taurus , Equus Caballus | XGDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE |
| Cytochrome c oxidase subunit 2 | B | 227 | Bos Taurus , Equus Caballus | MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML |
| Cytochrome c oxidase subunit 2 | O | 227 | Bos Taurus , Equus Caballus | MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML |
| Cytochrome c oxidase subunit 3 | C | 259 | Bos Taurus , Equus Caballus | HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS |
| Cytochrome c oxidase subunit 3 | P | 259 | Bos Taurus , Equus Caballus | HQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS |
| Cytochrome c oxidase subunit 4 isoform 1, mitochondrial | D | 144 | Bos Taurus , Equus Caballus | SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK |
| Cytochrome c oxidase subunit 4 isoform 1, mitochondrial | Q | 144 | Bos Taurus , Equus Caballus | SVVKSEDYALPSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK |
| Cytochrome c oxidase subunit 5A, mitochondrial | E | 105 | Bos Taurus , Equus Caballus | HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV |
| Cytochrome c oxidase subunit 5A, mitochondrial | R | 105 | Bos Taurus , Equus Caballus | HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV |
| Cytochrome c oxidase subunit 5B, mitochondrial | F | 98 | Bos Taurus , Equus Caballus | ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQLAH |
| Cytochrome c oxidase subunit 5B, mitochondrial | S | 98 | Bos Taurus , Equus Caballus | ASGGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVPHQLAH |
| Cytochrome c oxidase subunit 6A2, mitochondrial | G | 84 | Bos Taurus , Equus Caballus | ASAAKGDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK |
| Cytochrome c oxidase subunit 6A2, mitochondrial | T | 84 | Bos Taurus , Equus Caballus | ASAAKGDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDGNHTFFHNPRVNPLPTGYEK |
| Cytochrome c oxidase subunit 6B1 | H | 79 | Bos Taurus , Equus Caballus | KIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI |
| Cytochrome c oxidase subunit 6B1 | U | 79 | Bos Taurus , Equus Caballus | KIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI |
| Cytochrome c oxidase subunit 6C | I | 73 | Bos Taurus , Equus Caballus | STALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK |
| Cytochrome c oxidase subunit 6C | V | 73 | Bos Taurus , Equus Caballus | STALAKPQMRGLLARRLRFHIVGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-03-24 Deposition Author(s): Aoe, S. , Baba, J. , Shimada, A. , Shimada, S. , Tsukihara, T. , Yamashita, E.