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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5F7N

Blood group antigen binding adhesin baba of helicobacter pylori strain 17875 in complex with blood group a lewis b pentasaccharide

PDB DOI: 10.2210/pdb5f7n/pdb

Classification: CELL ADHESION
Organism(s): Helicobacter Pylori , Vicugna Pacos

Deposited: 2015-12-08
Deposition Author(s): Boren, T. , Gideonsson, P. , Moonens, K. , Muyldermans, S. , Oscarson, S. , Remaut, H. , Romao, E. , Subedi, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.28 Å

5f7n
Literature

Blood group antigen binding adhesin baba of helicobacter pylori strain 17875 in complex with blood group a lewis b pentasaccharide

Boren, T. , Gideonsson, P. , Moonens, K. , Muyldermans, S. , Oscarson, S. , Remaut, H. , Romao, E. , Subedi, S.

Primary Citation of Related Structures: 5F7N


Proteins
Molecule Chains Sequence Length Organism Sequence
Adhesin binding fucosylated histo-blood group antigen A 466 Helicobacter Pylori , Vicugna Pacos ASWSHPQFEKSGGGGGLVPRGSGIQDLSDNYENLSKLLTRYSTLNTLIKLSADPSAINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVLGYATQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNRYKPGYYGPMSIENFKKLNEAYQILQTALNKGLPALKENNGTVSVTYTYTCSGEGNDNCSKKATGVSDQNGGTKTKTQTIDGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFSVTNKSGGPQMEPTRGKLCGFTEEISAIQKMITDAQELVNQTSVINEHEQSTPVGGNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGTFKNFVTGFLATCNNKSTAGTSGTQGSPPGTVTTQTFASGCAYVEQTITNLNNSIAHFGTQEQQIQQAENIADTLVNFGSHHHHHH
Adhesin binding fucosylated histo-blood group antigen B 466 Helicobacter Pylori , Vicugna Pacos ASWSHPQFEKSGGGGGLVPRGSGIQDLSDNYENLSKLLTRYSTLNTLIKLSADPSAINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVLGYATQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNRYKPGYYGPMSIENFKKLNEAYQILQTALNKGLPALKENNGTVSVTYTYTCSGEGNDNCSKKATGVSDQNGGTKTKTQTIDGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFSVTNKSGGPQMEPTRGKLCGFTEEISAIQKMITDAQELVNQTSVINEHEQSTPVGGNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGTFKNFVTGFLATCNNKSTAGTSGTQGSPPGTVTTQTFASGCAYVEQTITNLNNSIAHFGTQEQQIQQAENIADTLVNFGSHHHHHH
Nanobody Nb-ER19 C 120 Helicobacter Pylori , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCAASGSIFSGNVMGWYRQAPGKLREWVAAITPQGVPNYADSVKGRFTISRDNAKNMLYLQMSSLKPEDTALYYCNRLPNYRSWGQGTQVTVSSHHHHHH
Nanobody Nb-ER19 D 120 Helicobacter Pylori , Vicugna Pacos QVQLQESGGGLVQPGGSLRLSCAASGSIFSGNVMGWYRQAPGKLREWVAAITPQGVPNYADSVKGRFTISRDNAKNMLYLQMSSLKPEDTALYYCNRLPNYRSWGQGTQVTVSSHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-12-08
Deposition Author(s): Boren, T. , Gideonsson, P. , Moonens, K. , Muyldermans, S. , Oscarson, S. , Remaut, H. , Romao, E. , Subedi, S.