5F5F
X-ray structure of roquin roq domain in complex with a selex-derived hexa-loop rna motif
PDB DOI: 10.2210/pdb5f5f/pdb
Classification: RNA BINDING PROTEIN Organism(s): Mus Musculus
Deposited: 2015-12-04 Deposition Author(s): Janowski, R. , Niessing, D. , Sattler, M. , Schlundt, A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
X-ray structure of roquin roq domain in complex with a selex-derived hexa-loop rna motif
Janowski, R. , Niessing, D. , Sattler, M. , Schlundt, A.
Primary Citation of Related Structures: 5F5F
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Roquin-1 | A | 190 | Mus Musculus | LQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL |
| Roquin-1 | C | 190 | Mus Musculus | LQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL |
| Roquin-1 | E | 190 | Mus Musculus | LQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL |
| Roquin-1 | G | 190 | Mus Musculus | LQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (5'-R(P*UP*GP*AP*CP*UP*GP*CP*GP*UP*UP*UP*UP*AP*GP*GP*AP*GP*UP*UP*A)-3') | b | 20 | NA | UGACUGCGUUUUAGGAGUUA |
| RNA (5'-R(P*UP*GP*AP*CP*UP*GP*CP*GP*UP*UP*UP*UP*AP*GP*GP*AP*GP*UP*UP*A)-3') | d | 20 | NA | UGACUGCGUUUUAGGAGUUA |
| RNA (5'-R(P*UP*GP*AP*CP*UP*GP*CP*GP*UP*UP*UP*UP*AP*GP*GP*AP*GP*UP*UP*A)-3') | f | 20 | NA | UGACUGCGUUUUAGGAGUUA |
| RNA (5'-R(P*UP*GP*AP*CP*UP*GP*CP*GP*UP*UP*UP*UP*AP*GP*GP*AP*GP*UP*UP*A)-3') | h | 20 | NA | UGACUGCGUUUUAGGAGUUA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-12-04 Deposition Author(s): Janowski, R. , Niessing, D. , Sattler, M. , Schlundt, A.