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5DDG

The structure of transcriptional factor arar from bacteroides thetaiotaomicron vpi in complex with target double strand dna

PDB DOI: 10.2210/pdb5ddg/pdb

Classification: TRANSCRIPTION REGULATOR/DNA
Organism(s): Kitasatospora Mediocidica Kctc 9733 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2015-08-24
Deposition Author(s): Chang, C. , Joachimiak, A. , Midwest Center For Structural Genomics (Mcsg) , Rodionov, D. , Tesar, C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.06 Å

Literature

The structure of transcriptional factor arar from bacteroides thetaiotaomicron vpi in complex with target double strand dna

Chang, C. , Joachimiak, A. , Midwest Center For Structural Genomics (Mcsg) , Rodionov, D. , Tesar, C.

Primary Citation of Related Structures: 5DDG


Proteins
Molecule Chains Sequence Length Organism Sequence
transcriptional factor AraR A 228 Kitasatospora Mediocidica Kctc 9733 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SNAMKNYYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAFGAIDRDPGERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFDHPEMVDKAREMMKQKASVEPIGFNLLPKLFTLSQLQSLYEAIYGEPMDKRNFRKRVAEMDFIEKTDKIDKLGSKRGAALYKFNGKAYRKDPKFKL
transcriptional factor AraR B 228 Kitasatospora Mediocidica Kctc 9733 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SNAMKNYYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAFGAIDRDPGERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFDHPEMVDKAREMMKQKASVEPIGFNLLPKLFTLSQLQSLYEAIYGEPMDKRNFRKRVAEMDFIEKTDKIDKLGSKRGAALYKFNGKAYRKDPKFKL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (27-MER) c 27 NA GCAAAAGTGTTACTTTTACACCCATGC
DNA (27-MER) d 27 NA GCATGGGTGTAAAAGTAACACTTTTGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-08-24
Deposition Author(s): Chang, C. , Joachimiak, A. , Midwest Center For Structural Genomics (Mcsg) , Rodionov, D. , Tesar, C.