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5D0B

Crystal structure of epoxyqueuosine reductase with a trna-tyr epoxyqueuosine-modified trna stem loop

PDB DOI: 10.2210/pdb5d0b/pdb

Classification: oxidoreductase/RNA
Organism(s): Bacillus Subtilis (Strain 168) , Synthetic Construct

Deposited: 2015-08-03
Deposition Author(s): Bandarian, V. , Dowling, D.P. , Drennan, C.L. , Kohrer, C. , Miles, Z.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.645 Å

5d0b
Literature

Crystal structure of epoxyqueuosine reductase with a trna-tyr epoxyqueuosine-modified trna stem loop

Bandarian, V. , Dowling, D.P. , Drennan, C.L. , Kohrer, C. , Miles, Z.D.

Primary Citation of Related Structures: 5D0B


Proteins
Molecule Chains Sequence Length Organism Sequence
Epoxyqueuosine reductase A 437 Bacillus Subtilis (Strain 168) , Synthetic Construct MASRGSHHHHHHGAGDRGPEFELGTRGSMNVYQLKEELIEYAKSIGVDKIGFTTADTFDSLKDRLILQESLGYLSGFEEPDIEKRVTPKLLLPKAKSIVAIALAYPSRMKDAPRSTRTERRGIFCRASWGKDYHDVLREKLDLLEDFLKSKHEDIRTKSMVDTGELSDRAVAERAGIGFSAKNCMITTPEYGSYVYLAEMITNIPFEPDVPIEDMCGSCTKCLDACPTGALVNPGQLNAQRCISFLTQTKGFLPDEFRTKIGNRLYGCDTCQTVCPLNKGKDFHLHPEMEPDPEIAKPLLKPLLAISNREFKEKFGHVSGSWRGKKPIQRNAILALAHFKDASALPELTELMHKDPRPVIRGTAAWAIGKIGDPAYAEELEKALEKEKDEEAKLEIEKGIELLKASGMTKQGLSGSLEVDLQGDHGLSAWSHPQFEK
Epoxyqueuosine reductase B 437 Bacillus Subtilis (Strain 168) , Synthetic Construct MASRGSHHHHHHGAGDRGPEFELGTRGSMNVYQLKEELIEYAKSIGVDKIGFTTADTFDSLKDRLILQESLGYLSGFEEPDIEKRVTPKLLLPKAKSIVAIALAYPSRMKDAPRSTRTERRGIFCRASWGKDYHDVLREKLDLLEDFLKSKHEDIRTKSMVDTGELSDRAVAERAGIGFSAKNCMITTPEYGSYVYLAEMITNIPFEPDVPIEDMCGSCTKCLDACPTGALVNPGQLNAQRCISFLTQTKGFLPDEFRTKIGNRLYGCDTCQTVCPLNKGKDFHLHPEMEPDPEIAKPLLKPLLAISNREFKEKFGHVSGSWRGKKPIQRNAILALAHFKDASALPELTELMHKDPRPVIRGTAAWAIGKIGDPAYAEELEKALEKEKDEEAKLEIEKGIELLKASGMTKQGLSGSLEVDLQGDHGLSAWSHPQFEK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-D(*GP*CP*AP*GP*AP*CP*UP*(56B)P*UP*AP*AP*AP*UP*CP*UP*GP*C)-3') f 17 NA GCAGACUXUAAAUCUGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2015-08-03
Deposition Author(s): Bandarian, V. , Dowling, D.P. , Drennan, C.L. , Kohrer, C. , Miles, Z.D.