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FASTA Sequence PDB Format mmCIF Format
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5AN9

Mechanism of eif6 release from the nascent 60s ribosomal subunit

PDB DOI: 10.2210/pdb5an9/pdb

Classification: TRANSLATION
Organism(s): Dictyostelium Discoideum , Homo Sapiens

Deposited: 2015-09-06
Deposition Author(s): Churcher, M. , Giudice, E. , Hilcenko, C. , Jin, L. , Kay, R.R. , Traynor, D. , Warren, A.J. , Weis, F. , Wong, C.C.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

5an9
Literature

Mechanism of eif6 release from the nascent 60s ribosomal subunit

Churcher, M. , Giudice, E. , Hilcenko, C. , Jin, L. , Kay, R.R. , Traynor, D. , Warren, A.J. , Weis, F. , Wong, C.C.

Primary Citation of Related Structures: 5AN9


Proteins
Molecule Chains Sequence Length Organism Sequence
60S RIBOSOMAL PROTEIN L3 A 398 Dictyostelium Discoideum , Homo Sapiens MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLKLTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKSRSTKA
RIBOSOME MATURATION PROTEIN SBDS J 250 Dictyostelium Discoideum , Homo Sapiens MSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDEKFE
60S RIBOSOMAL PROTEIN L9 B 188 Dictyostelium Discoideum , Homo Sapiens MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVLESN
60S ACIDIC RIBOSOMAL PROTEIN P0 C 205 Dictyostelium Discoideum , Homo Sapiens MSGAGSKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISEE
60S RIBOSOMAL PROTEIN L12 D 166 Dictyostelium Discoideum , Homo Sapiens MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPKKVGDDIAKATQPWKGMKVSVKLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKSLAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEVVEPK
60S RIBOSOMAL PROTEIN L23 E 136 Dictyostelium Discoideum , Homo Sapiens MSKAQAVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGNILGPVAKECSDLWPKVATNAGTIV
60S RIBOSOMAL PROTEIN L10 F 217 Dictyostelium Discoideum , Homo Sapiens MGRRPARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGANVKVITNHGTLAQYAKDIAAAN
60S RIBOSOMAL PROTEIN L24 G 69 Dictyostelium Discoideum , Homo Sapiens MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYKNTTTDVSAK
UBIQUITIN-60S RIBOSOMAL PROTEIN L40 H 52 Dictyostelium Discoideum , Homo Sapiens IEPSLVILARKYKCDKMICRKCYARLHPRAVNCRKKKCGHSNNLRPKKKLLK
EUKARYOTIC TRANSLATION INITIATION FACTOR 6 I 224 Dictyostelium Discoideum , Homo Sapiens MATRLQYENSCDVGVFLKLTNKYCLVGQCGSKQFLHTVENRLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQELQQIRNSLPDDVVVQRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCALTNQGALVHPMTSIADQDELSSLLQVPLVAGTVNRGNECVAAGCVVNDWTAIVGADTTATEISVIESIFAL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
26S RIBOSOMAL RNA n 3741 NA UCCGCCUCACCUUUGUAAGAUUACCCGCUGAACUUAAGCAUAUCAGUAAGCGGAGGAAAAGAAACUAACUAGGAUUCCGUCAGUAACGGCGAGUGAAGACGGAAUAGCCCAAGGUUCAAACCUGGAUCUCUUCGAGGUUAGGUGAUGUGACCUAUGGACUGAUGGAGCCCGCUGUUGUGACUGCUAAUUCCGUUUGGAAUUUCGAGUCGUAGAAGGUGAUAACCCUGUUCGCAGUAUCACAACAGUUGGACUUUGCCAUUAGCUCCACGAGUAGGAAUGUCUGAAAUUGCAUUCUGAAUGGGUGAUAAGAUUCAUCCAAGGCUAAAUAUAUGUUAGGAGAUCGAUAGCAUACAAGUACCGUGAGGGAAAGGUGAAAAGAACUUUGAAAAAAGGUUUAAAAGUAUUUGACACCGUUUAUGUGGAAGCGUUUACUUGGACCCCGAUUAAUGACGUCGGUUUAGCUCUAAUUCUUAGGUGGCCAAAGUAGAGUGUUACGUGCUGAUCAAAAGGUAACGGACAUUUGAUUCAUUGGUUAUCGACGAGGAAGGUACUCUAAAUCGGCCAGUUACUAACGGGUGAGAUCUGAUGUUUAUAAAAUGGGGGAUGAGGCUUAUCGGCUUGCUGGUGGCUCGCUCUCAAUAAUGGAUAUUGGGUUUCAUCAAGAGUGCAAAAUGGUGGCAAUUCACUAUUAGUGGUUAUUAAUUUUGUUUGCGUGGCUUGGCCUUGUCUACAGGUUAUCUUCGGAUGGCUUGUAGCUUUGUUGAACGCGUGGGCUUAAUGUUGUGAUUCUAGUAGCGUUACCAUAUCGUUAGAGUGGGUUCAAUAAAUGUCCCGUCUUGAAACACGGAUCAAGGAGGCCGUUUUGUGUGCGAGUGUAAGAGUAAUUAAAACUCUGACGCGUAUUGAAAGAAAGAAUACUCCAAAAGAUCGUAACUACGGUUACCUUCUGUAAGGAGUGCCCGAAUCAUGAGAACUCUGUUUCGAAAGGAUUUGCGGUUGAGCACCUAGAAUGGGACCCGAAAGGUUGUGAACUAUGCCUGAGGAAGGCGAAGUCAGGGGAAACUCUGAUGGAGGCUUGUCGCAAUGCUGACGUGCAAAUCGCUUGUCUAACUUGGGUAUAGGGGCGAAAGACUAAUCGAACAACCUAGUAGCUGGUUCCUUCCGAAGUUUCCCUCAGGAUAGCUGGAGCAGUAUUCUAGUUCCAUCUUGUAAAGACAAUGAUUAGCAGUUUCGGGGGCGUAAUGCUCUCAGCUGAUUCUCAAACUCUGAACGGGUGGGUAUCAUUUUAAUUCACUUAAUUGGAUUUUAAAAUUAAAUUGCACAUGUGCAAUGAAAAAUAGGAGCUCUUAGUGGGCCAUUUUUGGUAAGCAGAACUGGCGAUGUGGGUUGAACCAAAUAUUGGGAUAAGACGUCUAACAUUCACUAAUAGAUACCACAAAAGGUGUUAGUUCAUUAAGACAGCAGGACGGUGGCCAUGGAAGUCGGUAUCCGCUAAGGAGUGUGUAACAACUCACCUGCCAAAUGGACUAGCCCUGAAAAUGGAUGACGCUAGCAGUGGAUGGUCGAUGCCCAAUCGUUAAAAGAAGUGAUAAUACUUUUAACGUGUAGGAAGGCGUGAAGGUAACGUAGAAGCUUGAAUGUGAAUUCGAGUGGAGUUGUCUUUAGUGCAGAUCUUGAUGGUAGUAGCAAAUAUUCAAAAGAAUUUACUUUGAAGGCCGAAGUGGGGAAGGGUUCCAUAACAAUGGAAUUCACUUAUGGGUGAGUCGAUCCUAAGGUUUGGGUUAACUCUCUCUAAUAAGGUUACUAGGUCAUUGGAUCGAAAGUGAAGGUGGCUUUAACACUAGUGACUUUAUAGGCCGAAAGGGAAGCGGGUUAAAAUUCCUGCACCAUCGAAUGGGAUAUUAGGGUAACCGAUCGUAAUCCGGGACAUCAAUUGGCGGUCGAGGAAGAGUUAUCUUUUCUUGUUAACAUUGUCUUGGGGUCCUCCGAAUCAGGUCAACUGGAGACGAGGAUUCAUCGCACAAUGGAAGAGCACAGUCCUUUGGAUUGGGUCUCGCAUCCGCUAAAUGGUCCUUGAAAACCGGAUUAUGGUAUUUAAUCCUAUUUGGUGUUCGUACCAAUAACCACAUCAGGUCUCCAAGGUGAAUAGCCUCUGGUCAAAUGUAUUAAUGUAGAUAAGGGAAGUCGGCAAAACCGAUCUGUAACUUCGGGAUAAGGAUUGGCUCUAAAGGCUGGUGGAGUGGACAUAUUGGAGUUUGCUAUUUGUUUUUUACUUUUAGGAUGGGCAACUGUUUUGAAGGUUUAAGAUGGGUGGUAAUUCUUUCCAAUGUGAGGGCUUGCUCGUUCUGCUUUACGAUUAACAGCUAAUUUAGAACUGUGACGAUCACCGGGAAUCCAACUGUUUAAUUAAAACAAAGCAUUGCGAUAAGCUUAAAAGCUUUUGACGCAAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAGAUUCAACCUAGCACGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUCAAUGAGAUUCCCACUGUCCCUAACUACUAUACAGCGAAACCACUGCAAGGGGAACGGGCCUUGCAAAAACAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUCUGAUAUUGCAUAGUGACCUAAAAGGUGUAGAAUAGGUGGGAGGGGCAACCCGACGGUGAAAUACCACCCCUUUUGGCGUUACUUUGCUAACUUGGAAUAACAGUACCUCAUAAUUCAUUUUAUGAUGGUUUUGGUGAAUAAGCGGAUCAACCACGGGUGAAAUCUGUGCAAAUUGGGCAACUGAUUUGUAUAGCAAAGUAGUCCCUCUGGUCCCGUAUUAUGUCGACCAAGAACAGUUUCAGGUGGGGAGUUUGGCUGGGGCGGCACAUUUGUUAAAAGAUAACGCAAGUGUCCAAAGGCAGGCUCAGUGAGAACAGAAAUCUCACGUAGAGUAAAAGGGCAAAAGCCUGCUUGAUUCUGAUUUUCAGUACUAAUCGGAACUGGGAAACCAGGGCCUAUCGAUCCUUUAUGUGCUUAAAUCUUAACCCUAGAGGUGUCAGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCAGCCAAGCGCUCAUAGCGACGCUGCUUUUUGAUCCUUCGAUGUCGGCUCUUCUUAUCAUUGUGAAGCAGAAUUCACAAAGUGUUGGAUUGUUCACCCACUAACAAGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGUUGUCAAUUGUUUGCGUAAUAGUAGCAUGAUUUAGUACGAGAGGAACUGUCAUGCCGGAUCACUGGUCUGUAGGUUUAUUUGACAAAAUAGUGACCUGCCGCUACCAUCCGUUGGAUAAUGGCUGAACGCCUCUAAGUCAGAAUCCAUUCUAGAAACGCAAACCAAAUGCUUUAGAGUGUGAAUGUUGUAGGUAACAUUAGGUUGUUGGUGGGGGACCACUUUCAACUUUAAACCAUAUGAUUAAUCGCUGUUACACUGCAGUUUCCUUCCGGUUAUUGUGGUGGGUGGCUAAAUUCUAAUUUAUAUCCUCGUUCCGCUCAACUCUUCGAUUGUAGACGACUAUCAAAUGAACUAGGUGCUGUAAGCUUCCGAGUAGCGUUCAGUUACGAGGGGUUGAGGCUUUUCCAUUAGUUCUUU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2015-09-06
Deposition Author(s): Churcher, M. , Giudice, E. , Hilcenko, C. , Jin, L. , Kay, R.R. , Traynor, D. , Warren, A.J. , Weis, F. , Wong, C.C.