5AK9
The crystal structure of i-dmoi q42ak120m in complex with its target dna in the presence of 2mm mn
PDB DOI: 10.2210/pdb5ak9/pdb
Classification: HYDROLASE Organism(s): Desulfurococcus Mobilis , Synthetic Construct
Deposited: 2015-03-02 Deposition Author(s): D'Abramo, M. , Marcaida, M.J. , Marenchino, M. , Molina, R. , Montoya, G. , Prieto, J. , Redondo, P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.601 Å
The crystal structure of i-dmoi q42ak120m in complex with its target dna in the presence of 2mm mn
D'Abramo, M. , Marcaida, M.J. , Marenchino, M. , Molina, R. , Montoya, G. , Prieto, J. , Redondo, P.
Primary Citation of Related Structures: 5AK9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HOMING ENDONUCLEASE I-DMOI | A | 199 | Desulfurococcus Mobilis , Synthetic Construct | AHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| HOMING ENDONUCLEASE I-DMOI | E | 199 | Desulfurococcus Mobilis , Synthetic Construct | AHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| HOMING ENDONUCLEASE I-DMOI | J | 199 | Desulfurococcus Mobilis , Synthetic Construct | AHNNENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITAKSENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDMTLKRLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNISLRDRIKFVHTILSSHLNPLPPEAAALEHHHHHH |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP)-3' | b | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP)-3' | f | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP)-3' | k | 14 | NA | GCCTTGCCGGGTAA |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP)-3 | c | 11 | NA | GTTCCGGCGCG |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP)-3 | g | 11 | NA | GTTCCGGCGCG |
| 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP)-3 | l | 11 | NA | GTTCCGGCGCG |
| 25MER | d | 25 | NA | CGCGCCGGAACTTACCCGGCAAGGC |
| 25MER | h | 25 | NA | CGCGCCGGAACTTACCCGGCAAGGC |
| 25MER | n | 25 | NA | CGCGCCGGAACTTACCCGGCAAGGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-03-02 Deposition Author(s): D'Abramo, M. , Marcaida, M.J. , Marenchino, M. , Molina, R. , Montoya, G. , Prieto, J. , Redondo, P.