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4YPI
Structure of ebola virus nucleoprotein n-terminal fragment bound to a peptide derived from ebola vp35
PDB DOI: 10.2210/pdb4ypi/pdb
Classification: RNA BINDING PROTEIN Organism(s): Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2015-03-13 Deposition Author(s): Amarasinghe, G.K. , Binning, J.M. , Borek, D.M. , Center For Structural Genomics Of Infectious Diseases (Csgid) , Leung, D.W. , Otwinowski, Z.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.71 Å
Structure of ebola virus nucleoprotein n-terminal fragment bound to a peptide derived from ebola vp35
Amarasinghe, G.K. , Binning, J.M. , Borek, D.M. , Center For Structural Genomics Of Infectious Diseases (Csgid) , Leung, D.W. , Otwinowski, Z.
Primary Citation of Related Structures: 4YPI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Nucleoprotein | C | 348 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNE |
| Nucleoprotein | A | 348 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNE |
| Nucleoprotein | B | 348 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNE |
| Nucleoprotein | D | 348 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | QRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESRELDHLGLDDQEKKILMNFHQKKNE |
| Polymerase cofactor VP35 | G | 28 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPGPELSGWISEQLMTGRIPVSDIFCDI |
| Polymerase cofactor VP35 | E | 28 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPGPELSGWISEQLMTGRIPVSDIFCDI |
| Polymerase cofactor VP35 | F | 28 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPGPELSGWISEQLMTGRIPVSDIFCDI |
| Polymerase cofactor VP35 | H | 28 | Cydia Pomonella Granulosis Virus (Isolate Mexico/1963) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MPGPELSGWISEQLMTGRIPVSDIFCDI |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2015-03-13 Deposition Author(s): Amarasinghe, G.K. , Binning, J.M. , Borek, D.M. , Center For Structural Genomics Of Infectious Diseases (Csgid) , Leung, D.W. , Otwinowski, Z.