4V4F
The structure of the trp rna-binding attenuation protein (trap) bound to a rna molecule containing uagau repeats
PDB DOI: 10.2210/pdb4v4f/pdb
Classification: RNA BINDING PROTEIN Organism(s): Bacillus Stearothermophilus , Synthetic Construct
Deposited: 2003-12-08 Deposition Author(s): Antson, A.A. , Brzozowski, A.M. , Gollnick, P. , Hopcroft, N.H. , Manfredo, A. , Wendt, A.L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.9 Å
The structure of the trp rna-binding attenuation protein (trap) bound to a rna molecule containing uagau repeats
Antson, A.A. , Brzozowski, A.M. , Gollnick, P. , Hopcroft, N.H. , Manfredo, A. , Wendt, A.L.
Primary Citation of Related Structures: 4V4F
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a0 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a1 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a2 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a3 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a4 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a5 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a6 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a7 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a8 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | a9 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | az | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b0 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b1 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b2 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b3 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b4 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b5 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b6 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b7 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b8 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | b9 | 5 | NA | UAGAU |
| 5'-R(*UP*AP*GP*AP*UP)-3' | bz | 5 | NA | UAGAU |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AA | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AB | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AC | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AD | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AE | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AF | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AG | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AH | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AI | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AJ | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AK | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AL | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AM | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AN | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AO | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AP | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AQ | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AR | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AS | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AT | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AU | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | AV | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BA | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BB | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BC | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BD | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BE | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BF | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BG | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BH | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BI | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BJ | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BK | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BL | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BM | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BN | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BO | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BP | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BQ | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BR | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BS | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BT | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BU | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
| TRANSCRIPTION ATTENUATION PROTEIN MTRB | BV | 74 | Bacillus Stearothermophilus , Synthetic Construct | MYTNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIESEGKK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2003-12-08 Deposition Author(s): Antson, A.A. , Brzozowski, A.M. , Gollnick, P. , Hopcroft, N.H. , Manfredo, A. , Wendt, A.L.