PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4RQ3

Precatalytic ternary complex of human dna polymerase beta with gapped dna containing an 8-oxo-7,8-dihydro-guanine (8-oxog) and datp in the presence of cacl2

PDB DOI: 10.2210/pdb4rq3/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2014-10-31
Deposition Author(s): Suo, Z. , Vyas, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

4rq3
Literature

Precatalytic ternary complex of human dna polymerase beta with gapped dna containing an 8-oxo-7,8-dihydro-guanine (8-oxog) and datp in the presence of cacl2

Suo, Z. , Vyas, R.

Primary Citation of Related Structures: 4RQ3


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 343 Homo Sapiens , Synthetic Construct MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*TP*CP*GP*G)-3') d 5 NA GTCGG
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') p 10 NA GCTGATGCGC
DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') t 16 NA CCGACGGCGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-10-31
Deposition Author(s): Suo, Z. , Vyas, R.