4RIA
Fan1 nuclease bound to 5' phosphorylated nicked dna
PDB DOI: 10.2210/pdb4ria/pdb
Classification: hydrolase/dna Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2014-10-05 Deposition Author(s): Pavletich, N.P. , Wang, R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3 Å
Fan1 nuclease bound to 5' phosphorylated nicked dna
Primary Citation of Related Structures: 4RIA
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fanconi-associated nuclease 1 | A | 651 | Homo Sapiens , Synthetic Construct | GAHMTRNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYVRLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKSLAKTFHLANPNGQKQQLVDAFLKLAKQRSVIGAVILKRAKALAGQSVRICKGPRAVFSRILLLFSLTDSMEDEDAACGGQGQLSTVLLVNLGRMEFPSYTINRKTHIFQDRDDLIRYAAATHMLSDISSAMANGNWEEAKELAQCAKRDWNRLKNHPSLRCHEDLPLFLRCFTVGWIYTRILSRFVEILQRLHMYEEAVRELESLLSQRIYCPDSRGRWWDRLALNLHQHLKRLEPTIKCITEGLADPEVRTGHRLSLYQRAVRLRESPSCKKFKHLFQQLPEMAVQDVKHVTITGRLCPQRGMCKSVFVMEAGEAADPTTVLCSVEELALAHYRRSGFDQGIHGEGSTFSTLYGLLLWDIIFMDGIPDVFRNACQAFPLDLCTDSFFTSRRPALEARLQLIHDAPEESLRAWVAATWHEQEGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRHLAADFRHCRGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEVCHVVAVGAKSQSLS |
| Fanconi-associated nuclease 1 | B | 651 | Homo Sapiens , Synthetic Construct | GAHMTRNGPGQTTGHPYYLRSFLVVLKTVLENEDDMLLFDEQEKGIVTKFYQLSATGQKLYVRLFQRKLSWIKMTKLEYEEIALDLTPVIEELTNAGFLQTESELQELSEVLELLSAPELKSLAKTFHLANPNGQKQQLVDAFLKLAKQRSVIGAVILKRAKALAGQSVRICKGPRAVFSRILLLFSLTDSMEDEDAACGGQGQLSTVLLVNLGRMEFPSYTINRKTHIFQDRDDLIRYAAATHMLSDISSAMANGNWEEAKELAQCAKRDWNRLKNHPSLRCHEDLPLFLRCFTVGWIYTRILSRFVEILQRLHMYEEAVRELESLLSQRIYCPDSRGRWWDRLALNLHQHLKRLEPTIKCITEGLADPEVRTGHRLSLYQRAVRLRESPSCKKFKHLFQQLPEMAVQDVKHVTITGRLCPQRGMCKSVFVMEAGEAADPTTVLCSVEELALAHYRRSGFDQGIHGEGSTFSTLYGLLLWDIIFMDGIPDVFRNACQAFPLDLCTDSFFTSRRPALEARLQLIHDAPEESLRAWVAATWHEQEGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRHLAADFRHCRGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEVCHVVAVGAKSQSLS |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*AP*GP*CP*CP*AP*CP*GP*CP*CP*T)-3') | f | 10 | NA | AGCCACGCCT |
| DNA (5'-D(P*AP*GP*CP*CP*AP*CP*GP*CP*CP*T)-3') | l | 10 | NA | AGCCACGCCT |
| DNA (5'-D(P*AP*GP*AP*CP*TP*CP*CP*TP*C)-3') | k | 9 | NA | AGACTCCTC |
| DNA (5'-D(P*AP*GP*AP*CP*TP*CP*CP*TP*C)-3') | i | 9 | NA | AGACTCCTC |
| DNA (5'-D(*TP*TP*TP*TP*TP*TP*G*AP*GP*GP*CP*GP*TP*G)-3') | g | 14 | NA | TTTTTTGAGGCGTG |
| DNA (5'-D(*TP*TP*TP*TP*TP*TP*G*AP*GP*GP*CP*GP*TP*G)-3') | j | 14 | NA | TTTTTTGAGGCGTG |
| DNA (5'-D(P*GP*CP*TP*GP*AP*GP*GP*AP*GP*TP*CP*T)-3') | e | 12 | NA | GCTGAGGAGTCT |
| DNA (5'-D(P*GP*CP*TP*GP*AP*GP*GP*AP*GP*TP*CP*T)-3') | h | 12 | NA | GCTGAGGAGTCT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2014-10-05 Deposition Author(s): Pavletich, N.P. , Wang, R.