4RD5
Crystal structure of r.ngoavii restriction endonuclease b3 domain with cognate dna
PDB DOI: 10.2210/pdb4rd5/pdb
Classification: HYDROLASE/DNA Organism(s): Neisseria Gonorrhoeae , Synthetic Construct
Deposited: 2014-09-18 Deposition Author(s): Grazulis, S. , Siksnys, V. , Silanskas, A. , Tamulaitiene, G. , Zaremba, M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Crystal structure of r.ngoavii restriction endonuclease b3 domain with cognate dna
Grazulis, S. , Siksnys, V. , Silanskas, A. , Tamulaitiene, G. , Zaremba, M.
Primary Citation of Related Structures: 4RD5
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Restriction endonuclease R.NgoVII | A | 178 | Neisseria Gonorrhoeae , Synthetic Construct | MSHLENCLGVQKIAPEQIRQLFAQTSEYHFSIPAKTEEKSNLNVFFGEGRRDKRGFVKPRPWYEVELIVSKDITSQEGYPVLKSFTVITDDGWQFQCKTSGDYSKNFRSENDLKTLGKWIKGRLESHGCLQNNEKITHETLREYGNDHFELRSTDNPDVWLLSFKGKNSGGHHHHHHG |
| Restriction endonuclease R.NgoVII | B | 178 | Neisseria Gonorrhoeae , Synthetic Construct | MSHLENCLGVQKIAPEQIRQLFAQTSEYHFSIPAKTEEKSNLNVFFGEGRRDKRGFVKPRPWYEVELIVSKDITSQEGYPVLKSFTVITDDGWQFQCKTSGDYSKNFRSENDLKTLGKWIKGRLESHGCLQNNEKITHETLREYGNDHFELRSTDNPDVWLLSFKGKNSGGHHHHHHG |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*CP*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP*CP*C)-3') | c | 16 | NA | CCCTAAGCGGCAATCC |
| DNA (5'-D(*CP*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP*CP*C)-3') | e | 16 | NA | CCCTAAGCGGCAATCC |
| DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP*AP*GP*G)-3') | d | 16 | NA | GGGATTGCCGCTTAGG |
| DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP*AP*GP*G)-3') | f | 16 | NA | GGGATTGCCGCTTAGG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2014-09-18 Deposition Author(s): Grazulis, S. , Siksnys, V. , Silanskas, A. , Tamulaitiene, G. , Zaremba, M.