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4QI2

X-ray structure of the roq domain from murine roquin-1 in complex with a 23-mer tnf-cde rna

PDB DOI: 10.2210/pdb4qi2/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2014-05-30
Deposition Author(s): Janowski, R. , Niessing, D. , Sattler, M. , Schlundt, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3 Å

4qi2
Literature

X-ray structure of the roq domain from murine roquin-1 in complex with a 23-mer tnf-cde rna

Janowski, R. , Niessing, D. , Sattler, M. , Schlundt, A.

Primary Citation of Related Structures: 4QI2


Proteins
Molecule Chains Sequence Length Organism Sequence
Roquin-1 A 180 Mus Musculus , Synthetic Construct EEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQT
Roquin-1 B 180 Mus Musculus , Synthetic Construct EEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQT
Roquin-1 C 180 Mus Musculus , Synthetic Construct EEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQT
Roquin-1 D 180 Mus Musculus , Synthetic Construct EEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQT

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3') e 23 NA ACAUGUUUUCUGUGAAAACGGAG
RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3') f 23 NA ACAUGUUUUCUGUGAAAACGGAG
RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3') g 23 NA ACAUGUUUUCUGUGAAAACGGAG
RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3') h 23 NA ACAUGUUUUCUGUGAAAACGGAG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-05-30
Deposition Author(s): Janowski, R. , Niessing, D. , Sattler, M. , Schlundt, A.