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4OV5

Structure of hla-dr1 with a bound peptide with non-optimal alanine in the p1 pocket

PDB DOI: 10.2210/pdb4ov5/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2014-02-20
Deposition Author(s): Stern, L.J. , Trenh, P. , Yin, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.199 Å

4ov5
Literature

Structure of hla-dr1 with a bound peptide with non-optimal alanine in the p1 pocket

Stern, L.J. , Trenh, P. , Yin, L.

Primary Citation of Related Structures: 4OV5


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class II histocompatibility antigen, DR alpha chain A 182 Homo Sapiens , Synthetic Construct IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
HLA class II histocompatibility antigen, DR alpha chain D 182 Homo Sapiens , Synthetic Construct IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
HLA class II histocompatibility antigen, DR alpha chain G 182 Homo Sapiens , Synthetic Construct IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
HLA class II histocompatibility antigen, DR alpha chain J 182 Homo Sapiens , Synthetic Construct IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
HLA class II histocompatibility antigen, DR alpha chain M 182 Homo Sapiens , Synthetic Construct IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
HLA class II histocompatibility antigen, DR alpha chain P 182 Homo Sapiens , Synthetic Construct IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDA
HLA class II histocompatibility antigen, DRB1-1 beta chain B 190 Homo Sapiens , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
HLA class II histocompatibility antigen, DRB1-1 beta chain E 190 Homo Sapiens , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
HLA class II histocompatibility antigen, DRB1-1 beta chain H 190 Homo Sapiens , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
HLA class II histocompatibility antigen, DRB1-1 beta chain K 190 Homo Sapiens , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
HLA class II histocompatibility antigen, DRB1-1 beta chain N 190 Homo Sapiens , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
HLA class II histocompatibility antigen, DRB1-1 beta chain Q 190 Homo Sapiens , Synthetic Construct GDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA
HLA class I histocompatibility antigen, A-2 alpha chain C 14 Homo Sapiens , Synthetic Construct GSDARFLRGYHLYA
HLA class I histocompatibility antigen, A-2 alpha chain F 14 Homo Sapiens , Synthetic Construct GSDARFLRGYHLYA
HLA class I histocompatibility antigen, A-2 alpha chain I 14 Homo Sapiens , Synthetic Construct GSDARFLRGYHLYA
HLA class I histocompatibility antigen, A-2 alpha chain L 14 Homo Sapiens , Synthetic Construct GSDARFLRGYHLYA
HLA class I histocompatibility antigen, A-2 alpha chain O 14 Homo Sapiens , Synthetic Construct GSDARFLRGYHLYA
HLA class I histocompatibility antigen, A-2 alpha chain R 14 Homo Sapiens , Synthetic Construct GSDARFLRGYHLYA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2014-02-20
Deposition Author(s): Stern, L.J. , Trenh, P. , Yin, L.