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4NM8

Crystal structure of broadly neutralizing antibody cr8043 bound to h3 influenza hemagglutinin

PDB DOI: 10.2210/pdb4nm8/pdb

Classification: viral protein/immune system
Organism(s): Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110)

Deposited: 2013-11-14
Deposition Author(s): Lee, P.S. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 4.0041 Å

4nm8
Literature

Crystal structure of broadly neutralizing antibody cr8043 bound to h3 influenza hemagglutinin

Lee, P.S. , Wilson, I.A.

Primary Citation of Related Structures: 4NM8


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin HA1 Chain A 323 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) ADPGATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTR
Hemagglutinin HA1 Chain C 323 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) ADPGATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTR
Hemagglutinin HA1 Chain E 323 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) ADPGATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTR
Hemagglutinin HA2 Chain B 176 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTGRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKGV
Hemagglutinin HA2 Chain D 176 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTGRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKGV
Hemagglutinin HA2 Chain F 176 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTGRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKGV
Antibody CR8043, Light Chain L 220 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) DIQMTQSPDSLAVSLGERATINCKSSQSVFSSSTNKNYLAWYQQKPGQPPKVLIYWSSTRESGVPDRFSASGSGTDFTLTISSLQAADVAVYYCHQYYTAPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Antibody CR8043, Light Chain M 220 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) DIQMTQSPDSLAVSLGERATINCKSSQSVFSSSTNKNYLAWYQQKPGQPPKVLIYWSSTRESGVPDRFSASGSGTDFTLTISSLQAADVAVYYCHQYYTAPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Antibody CR8043, Light Chain N 220 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) DIQMTQSPDSLAVSLGERATINCKSSQSVFSSSTNKNYLAWYQQKPGQPPKVLIYWSSTRESGVPDRFSASGSGTDFTLTISSLQAADVAVYYCHQYYTAPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Antibody CR8043, Heavy Chain H 230 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) QVQLVQSGAEVKKPGASVKLSCKASGYTFTAYSMHWVRQAPGQSLEWLGWINTAIGNTQYSQKFQDRVTITRDTSARTSYMELSSLRSGDTAVYFCARGASWDARGWSGYWGKGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH
Antibody CR8043, Heavy Chain I 230 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) QVQLVQSGAEVKKPGASVKLSCKASGYTFTAYSMHWVRQAPGQSLEWLGWINTAIGNTQYSQKFQDRVTITRDTSARTSYMELSSLRSGDTAVYFCARGASWDARGWSGYWGKGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH
Antibody CR8043, Heavy Chain J 230 Salmonella Enterica , Actinoplanes Sp. (Strain Atcc 31044 / Cbs 674.73 / Se50/110) QVQLVQSGAEVKKPGASVKLSCKASGYTFTAYSMHWVRQAPGQSLEWLGWINTAIGNTQYSQKFQDRVTITRDTSARTSYMELSSLRSGDTAVYFCARGASWDARGWSGYWGKGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-11-14
Deposition Author(s): Lee, P.S. , Wilson, I.A.