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FASTA Sequence PDB Format mmCIF Format
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4KZE

Crystal structure of an rna aptamer in complex with fab

PDB DOI: 10.2210/pdb4kze/pdb

Classification: immune system/rna
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2013-05-29
Deposition Author(s): Huang, H. , Koldobskaya, Y. , Li, N. , Piccirilli, J.A. , Rice, P.A. , Suslov, N.B.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.404 Å

4kze
Literature

Crystal structure of an rna aptamer in complex with fab

Huang, H. , Koldobskaya, Y. , Li, N. , Piccirilli, J.A. , Rice, P.A. , Suslov, N.B.

Primary Citation of Related Structures: 4KZE


Proteins
Molecule Chains Sequence Length Organism Sequence
BL3-6 Fab antibody, heavy chain H 232 Mus Musculus , Synthetic Construct EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
BL3-6 Fab antibody, light chain L 215 Mus Musculus , Synthetic Construct SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (84-MER) r 84 NA GGACGCGACCGAAAUGGUGAAGGACGGGUCCAGUGCGAAACACGCACUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGUC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-05-29
Deposition Author(s): Huang, H. , Koldobskaya, Y. , Li, N. , Piccirilli, J.A. , Rice, P.A. , Suslov, N.B.