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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

4KUD

Crystal structure of n-terminal acetylated sir3 bah domain d205n mutant in complex with yeast nucleosome core particle

PDB DOI: 10.2210/pdb4kud/pdb

Classification: STRUCTURAL PROTEIN/TRANSCRIPTION/DNA
Organism(s): Saccharomyces Cerevisiae , Synthetic Construct

Deposited: 2013-05-22
Deposition Author(s): Fang, Q. , He, M. , Ren, R. , Sun, Y. , Wang, H. , Wang, M. , Xu, R.M. , Yang, D. , Yang, N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.203 Å

4kud
Literature

Crystal structure of n-terminal acetylated sir3 bah domain d205n mutant in complex with yeast nucleosome core particle

Fang, Q. , He, M. , Ren, R. , Sun, Y. , Wang, H. , Wang, M. , Xu, R.M. , Yang, D. , Yang, N.

Primary Citation of Related Structures: 4KUD


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3 A 136 Saccharomyces Cerevisiae , Synthetic Construct MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS
Histone H3 E 136 Saccharomyces Cerevisiae , Synthetic Construct MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS
Histone H4 B 103 Saccharomyces Cerevisiae , Synthetic Construct MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG
Histone H4 F 103 Saccharomyces Cerevisiae , Synthetic Construct MSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG
Histone H2A.2 C 132 Saccharomyces Cerevisiae , Synthetic Construct MAGGKGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKTAKASQEL
Histone H2A.2 G 132 Saccharomyces Cerevisiae , Synthetic Construct MAGGKGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKTAKASQEL
Histone H2B.1 D 131 Saccharomyces Cerevisiae , Synthetic Construct MSAKAEKKPASKAPAEKKPAAKKTSTSTDGKKRSKARKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA
Histone H2B.1 H 131 Saccharomyces Cerevisiae , Synthetic Construct MSAKAEKKPASKAPAEKKPAAKKTSTSTDGKKRSKARKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA
Regulatory protein SIR3 K 224 Saccharomyces Cerevisiae , Synthetic Construct AKTLKDLDGWQVIITDDQGRVIDDNNRRRSRKRGGENVFLKRISDGLSFGKGESVIFNDNVTETYSVYLIHEIRLNTLNNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFFNEVNKSELYLTAELSEIWLKDFIAVGQILPESQWNDSSIDKIEDRDFLVRYACEPTAEKFVPIDIFQIIRRVKEMEPKQSNEYLKRVSVPVSGQKHHHHHH
Regulatory protein SIR3 L 224 Saccharomyces Cerevisiae , Synthetic Construct AKTLKDLDGWQVIITDDQGRVIDDNNRRRSRKRGGENVFLKRISDGLSFGKGESVIFNDNVTETYSVYLIHEIRLNTLNNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFFNEVNKSELYLTAELSEIWLKDFIAVGQILPESQWNDSSIDKIEDRDFLVRYACEPTAEKFVPIDIFQIIRRVKEMEPKQSNEYLKRVSVPVSGQKHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
nucloesome DNA i 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
nucloesome DNA j 146 NA ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCGGAATTCCGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-05-22
Deposition Author(s): Fang, Q. , He, M. , Ren, R. , Sun, Y. , Wang, H. , Wang, M. , Xu, R.M. , Yang, D. , Yang, N.