4H19
Crystal structure of an enolase (mandelate racemase subgroup, target efi-502087) from agrobacterium tumefaciens, with bound mg and d-ribonohydroxamate, ordered loop
PDB DOI: 10.2210/pdb4h19/pdb
Classification: LYASE Organism(s): Agrobacterium Tumefaciens
Deposited: 2012-09-10 Deposition Author(s): Almo, S.C. , Bouvier, J.T. , Enzyme Function Initiative (Efi) , Gerlt, J.A. , Imker, H.J. , Morisco, L.L. , Sojitra, S. , Vetting, M.W. , Wasserman, S.R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.8 Å
Crystal structure of an enolase (mandelate racemase subgroup, target efi-502087) from agrobacterium tumefaciens, with bound mg and d-ribonohydroxamate, ordered loop
Almo, S.C. , Bouvier, J.T. , Enzyme Function Initiative (Efi) , Gerlt, J.A. , Imker, H.J. , Morisco, L.L. , Sojitra, S. , Vetting, M.W. , Wasserman, S.R.
Primary Citation of Related Structures: 4H19
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Mandelate racemase | A | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | B | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | C | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | D | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | E | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | F | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | G | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | H | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | I | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | K | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | L | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | M | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | N | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | P | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | J | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
| Mandelate racemase | O | 372 | Agrobacterium Tumefaciens | MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSDRLITSCISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQVHVHLSYWHPASTILEYIPWIKDHFEEPIHVRDGVYKRPEQPGASTTPLAESFTRYGKAVK |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-09-10 Deposition Author(s): Almo, S.C. , Bouvier, J.T. , Enzyme Function Initiative (Efi) , Gerlt, J.A. , Imker, H.J. , Morisco, L.L. , Sojitra, S. , Vetting, M.W. , Wasserman, S.R.