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4F6N

Crystal structure of kaiso zinc finger dna binding protein in complex with methylated cpg site dna

PDB DOI: 10.2210/pdb4f6n/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2012-05-15
Deposition Author(s): Buck-Koehntop, B.A. , Dyson, H.J. , Ekiert, D.C. , Martinez-Yamout, M.A. , Stanfield, R.L. , Wilson, I.A. , Wright, P.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

Literature

Crystal structure of kaiso zinc finger dna binding protein in complex with methylated cpg site dna

Buck-Koehntop, B.A. , Dyson, H.J. , Ekiert, D.C. , Martinez-Yamout, M.A. , Stanfield, R.L. , Wilson, I.A. , Wright, P.E.

Primary Citation of Related Structures: 4F6N


Proteins
Molecule Chains Sequence Length Organism Sequence
Transcriptional regulator Kaiso A 133 Homo Sapiens , Synthetic Construct ANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYLSDRS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*TP*GP*TP*CP*AP*CP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*AP*TP*AP*CP*G)-3') d 19 NA GTGTCACCGCGTCTATACG
DNA (5'-D(*CP*GP*TP*AP*TP*AP*GP*AP*(5CM)P*GP*(5CM)P*GP*GP*TP*GP*AP*CP*AP*C)-3') e 19 NA CGTATAGACGCGGTGACAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-05-15
Deposition Author(s): Buck-Koehntop, B.A. , Dyson, H.J. , Ekiert, D.C. , Martinez-Yamout, M.A. , Stanfield, R.L. , Wilson, I.A. , Wright, P.E.