The bicyclic intermediate structure provides insights into the desuccinylation mechanism of sirt5
PDB DOI: 10.2210/pdb4f4u/pdb
Classification: HYDROLASE Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2012-05-11 Deposition Author(s): Hao, Q. , Zhou, Y.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
NAD-dependent lysine demalonylase and desuccinylase sirtuin-5, mitochondrial | A | 273 | Homo Sapiens , Synthetic Construct | GSFTARPSSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEALA |
NAD-dependent lysine demalonylase and desuccinylase sirtuin-5, mitochondrial | B | 273 | Homo Sapiens , Synthetic Construct | GSFTARPSSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEALA |
peptide from Histone H3.1 | C | 12 | Homo Sapiens , Synthetic Construct | KQTARXSTGGKA |
peptide from Histone H3.1 | D | 12 | Homo Sapiens , Synthetic Construct | KQTARXSTGGKA |
Method: X-RAY DIFFRACTION