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4EW0

Mouse mbd4 glycosylase domain in complex with a g:5hmu (5-hydroxymethyluracil) mismatch

PDB DOI: 10.2210/pdb4ew0/pdb

Classification: HYDROLASE/DNA
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2012-04-26
Deposition Author(s): Cheng, X. , Hashimoto, H. , Zhang, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.39 Å

4ew0
Literature

Mouse mbd4 glycosylase domain in complex with a g:5hmu (5-hydroxymethyluracil) mismatch

Cheng, X. , Hashimoto, H. , Zhang, X.

Primary Citation of Related Structures: 4EW0


Proteins
Molecule Chains Sequence Length Organism Sequence
Methyl-CpG-binding domain protein 4 A 146 Mus Musculus , Synthetic Construct HMKWTPPRSPFNLVQEILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEWKQVHPENHKLNKYHDWLWENHEKLSLS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3') b 11 NA TCAGCGCATGG
DNA (5'-D(*CP*CP*AP*TP*GP*(5HU)P*GP*CP*TP*GP*A)-3') c 11 NA CCATGUGCTGA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2012-04-26
Deposition Author(s): Cheng, X. , Hashimoto, H. , Zhang, X.