3WVP
Time-resolved crystal structure of hindiii with 60sec soaking
PDB DOI: 10.2210/pdb3wvp/pdb
Classification: HYDROLASE/DNA Organism(s): Haemophilus Influenzae , Synthetic Construct
Deposited: 2014-06-02 Deposition Author(s): Kawamura, T. , Kobayashi, T. , Watanabe, N.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.3 Å
Time-resolved crystal structure of hindiii with 60sec soaking
Kawamura, T. , Kobayashi, T. , Watanabe, N.
Primary Citation of Related Structures: 3WVP
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Type-2 restriction enzyme HindIII | C | 300 | Haemophilus Influenzae , Synthetic Construct | MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL |
| Type-2 restriction enzyme HindIII | D | 300 | Haemophilus Influenzae , Synthetic Construct | MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL |
| Type-2 restriction enzyme HindIII | A | 300 | Haemophilus Influenzae , Synthetic Construct | MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL |
| Type-2 restriction enzyme HindIII | B | 300 | Haemophilus Influenzae , Synthetic Construct | MKKSALEKLLSLIENLTNQEFKQATNSLISFIYKLNRNEVIELVRSIGILPEAIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPLEQRGNAGDVIALSKEFNYGLVADAKSFRLSRTAKNQKDFKVKALSEWREDKDYAVLTAPFFQYPTTKSQIFKQSLDENVLLFSWEHLAILLQLDLEETNIFSFEQLWNFPKKQSKKTSVSDAENNFMRDFNKYFMDLFKIDKDTLNQLLQKEINFIEERSLIEKEYWKKQINIIKNFTREEAIEALLKDINMSSKIETIDSFIKGIKSNDRLYL |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | k | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | l | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | i | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | j | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | e | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | f | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | g | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3') | h | 12 | NA | GCCAAGCTTGGC |
| DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') | m | 8 | NA | AGCTTGGC |
| DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') | n | 8 | NA | AGCTTGGC |
| DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') | q | 8 | NA | AGCTTGGC |
| DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') | r | 8 | NA | AGCTTGGC |
| DNA (5'-D(*GP*CP*CP*A)-3') | o | 4 | NA | GCCA |
| DNA (5'-D(*GP*CP*CP*A)-3') | p | 4 | NA | GCCA |
| DNA (5'-D(*GP*CP*CP*A)-3') | s | 4 | NA | GCCA |
| DNA (5'-D(*GP*CP*CP*A)-3') | t | 4 | NA | GCCA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2014-06-02 Deposition Author(s): Kawamura, T. , Kobayashi, T. , Watanabe, N.