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3W6V

Crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna

PDB DOI: 10.2210/pdb3w6v/pdb

Classification: TRANSCRIPTION ACTIVATOR/DNA
Organism(s): Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2013-02-22
Deposition Author(s): Miyazono, K. , Nagata, K. , Ohnishi, Y. , Ohtsuka, J. , Tanokura, M. , Yao, M.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.95 Å

Literature

Crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna

Miyazono, K. , Nagata, K. , Ohnishi, Y. , Ohtsuka, J. , Tanokura, M. , Yao, M.D.

Primary Citation of Related Structures: 3W6V


Proteins
Molecule Chains Sequence Length Organism Sequence
AdpA A 147 Dengue Virus 4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSHHHHHHSSGLVPRGSHMGQERYLDRSLPEEIGSDPLAEVVAWALEHLHEQFDVETLAARAYMSRRTFDRRFRSLTGSAPLQWLITQRVLQAQRLLETSDYSVDEVAGRCGFRSPVALRGHFRRQLGSSPAAYRAAYRARRPQG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*TP*GP*TP*GP*AP*AP*CP*CP*CP*GP*CP*CP*AP*AP*C)-3') b 16 NA CTGTGAACCCGCCAAC
DNA (5'-D(*AP*GP*GP*TP*TP*GP*GP*CP*GP*GP*GP*TP*TP*CP*AP*C)-3') c 16 NA AGGTTGGCGGGTTCAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2013-02-22
Deposition Author(s): Miyazono, K. , Nagata, K. , Ohnishi, Y. , Ohtsuka, J. , Tanokura, M. , Yao, M.D.