3VW4
Crystal structure of the dna-binding domain of cole2-p9 rep in complex with the replication origin
PDB DOI: 10.2210/pdb3vw4/pdb
Classification: DNA BINDING PROTEIN/DNA Organism(s): Escherichia Coli , Synthetic Construct
Deposited: 2012-07-31 Deposition Author(s): Itoh, T. , Itou, H. , Shirakihara, Y. , Yagura, M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Crystal structure of the dna-binding domain of cole2-p9 rep in complex with the replication origin
Itoh, T. , Itou, H. , Shirakihara, Y. , Yagura, M.
Primary Citation of Related Structures: 3VW4
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Rep | A | 128 | Escherichia Coli , Synthetic Construct | MGHHHHHHRNYHLFEKVRKWAYRAIRQGWPVFSQWLDAVIQRVEMYNASLPVPLSPAECRAIGKSIAKYTHRKFSPEGFSAVQAARGRKGGTKSKRAAVPTSARSLKPWEALGISRATYYRKLKCDPD |
| Rep | B | 128 | Escherichia Coli , Synthetic Construct | MGHHHHHHRNYHLFEKVRKWAYRAIRQGWPVFSQWLDAVIQRVEMYNASLPVPLSPAECRAIGKSIAKYTHRKFSPEGFSAVQAARGRKGGTKSKRAAVPTSARSLKPWEALGISRATYYRKLKCDPD |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*AP*AP*TP*GP*AP*GP*AP*CP*CP*AP*GP*AP*TP*AP*AP*GP*CP*CP*TP*TP*AP*TP*C)-3') | c | 23 | NA | AATGAGACCAGATAAGCCTTATC |
| DNA (5'-D(P*AP*AP*TP*GP*AP*GP*AP*CP*CP*AP*GP*AP*TP*AP*AP*GP*CP*CP*TP*TP*AP*TP*C)-3') | e | 23 | NA | AATGAGACCAGATAAGCCTTATC |
| DNA (5'-D(P*GP*AP*TP*AP*AP*GP*GP*CP*TP*TP*AP*TP*CP*TP*GP*GP*TP*CP*TP*CP*AP*TP*T)-3') | d | 23 | NA | GATAAGGCTTATCTGGTCTCATT |
| DNA (5'-D(P*GP*AP*TP*AP*AP*GP*GP*CP*TP*TP*AP*TP*CP*TP*GP*GP*TP*CP*TP*CP*AP*TP*T)-3') | f | 23 | NA | GATAAGGCTTATCTGGTCTCATT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2012-07-31 Deposition Author(s): Itoh, T. , Itou, H. , Shirakihara, Y. , Yagura, M.