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3VA3

Crystal structure of rnase t in complex with a duplex dna product (stem loop dna with 2 nucleotide 3' overhang)

PDB DOI: 10.2210/pdb3va3/pdb

Classification: HYDROLASE/DNA
Organism(s): Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2011-12-28
Deposition Author(s): Hsiao, Y.-Y. , Yuan, H.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.714 Å

3va3
Literature

Crystal structure of rnase t in complex with a duplex dna product (stem loop dna with 2 nucleotide 3' overhang)

Hsiao, Y.-Y. , Yuan, H.S.

Primary Citation of Related Structures: 3VA3


Proteins
Molecule Chains Sequence Length Organism Sequence
Ribonuclease T A 235 Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSHHHHHHSSGLVPRGSHMSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSGYEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLSAAEEV
Ribonuclease T B 235 Adineta Vaga , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSHHHHHHSSGLVPRGSHMSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSGYEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLSAAEEV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*TP*T)-3') c 18 NA GGCCCTCTTTAGGGCCTT
DNA (5'-D(*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*TP*T)-3') d 18 NA GGCCCTCTTTAGGGCCTT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-12-28
Deposition Author(s): Hsiao, Y.-Y. , Yuan, H.S.