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3UAJ

Crystal structure of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5h2

PDB DOI: 10.2210/pdb3uaj/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Dengue Virus 4 , Pan Troglodytes

Deposited: 2011-10-21
Deposition Author(s): Cockburn, J.J.B. , Navarro-Sanchez, M.E. , Rey, F.A. , Stura, E.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.232 Å

3uaj
Literature

Crystal structure of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5h2

Cockburn, J.J.B. , Navarro-Sanchez, M.E. , Rey, F.A. , Stura, E.A.

Primary Citation of Related Structures: 3UAJ


Proteins
Molecule Chains Sequence Length Organism Sequence
envelope protein B 433 Dengue Virus 4 , Pan Troglodytes MRCVGVGNRDFVEGVSGGAWVDLVLEHGGCVTTMAQGKPTLDFELTKTTAKEVALLRTYCIEASISNITTATRCPTQGEPYLKEEQDQQYICRRDVVDRGWGNGCGLFGKGGVVTCAKFSCSGKITGNLVQIENLEYTVVVTVHNGDTHAVGNDTSNHGVTAMITPRSPSVEVKLPDYGELTLDCEPRSGIDFNEMILMKMKKKTWLVHKQWFLDLPLPWTAGADTSEVHWNYKERMVTFKVPHAKRQDVTVLGSQEGAMHSALAGATEVDSGDGNHMFAGHLKCKVRMEKLRIKGMSYTMCSGKFSIDKEMAETQHGTTVVKVKYEGAGAPCKVPIEIRDVNKEKVVGRIISSTPLAENTNSVTNIELEPPFGDSYIVIGVGNSALTLHWFRKGPFEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
envelope protein A 433 Dengue Virus 4 , Pan Troglodytes MRCVGVGNRDFVEGVSGGAWVDLVLEHGGCVTTMAQGKPTLDFELTKTTAKEVALLRTYCIEASISNITTATRCPTQGEPYLKEEQDQQYICRRDVVDRGWGNGCGLFGKGGVVTCAKFSCSGKITGNLVQIENLEYTVVVTVHNGDTHAVGNDTSNHGVTAMITPRSPSVEVKLPDYGELTLDCEPRSGIDFNEMILMKMKKKTWLVHKQWFLDLPLPWTAGADTSEVHWNYKERMVTFKVPHAKRQDVTVLGSQEGAMHSALAGATEVDSGDGNHMFAGHLKCKVRMEKLRIKGMSYTMCSGKFSIDKEMAETQHGTTVVKVKYEGAGAPCKVPIEIRDVNKEKVVGRIISSTPLAENTNSVTNIELEPPFGDSYIVIGVGNSALTLHWFRKGPFEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Heavy chain, monoclonal antibody 5H2 H 236 Dengue Virus 4 , Pan Troglodytes EVQLLESGPGLVKPSETLSLTCTVSGGSISDFYWSWLRQSPGKGLEWIGYAHSRVSAYYNPSLKSRVTISVDTSKNQISLRLSAVTAADTALYYCARQGTGTTGVSEDSFDLWGQGTKVIVSLASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVDHKPSNTKVDKKVEPKSCDTTSHHHHHH
Heavy chain, monoclonal antibody 5H2 C 236 Dengue Virus 4 , Pan Troglodytes EVQLLESGPGLVKPSETLSLTCTVSGGSISDFYWSWLRQSPGKGLEWIGYAHSRVSAYYNPSLKSRVTISVDTSKNQISLRLSAVTAADTALYYCARQGTGTTGVSEDSFDLWGQGTKVIVSLASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVDHKPSNTKVDKKVEPKSCDTTSHHHHHH
Light chain, monoclonal antibody 5H2 L 215 Dengue Virus 4 , Pan Troglodytes AELQMTQSPSSLSASVGDRVTITCRASQDISIRLNWYQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVACLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDNTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Light chain, monoclonal antibody 5H2 D 215 Dengue Virus 4 , Pan Troglodytes AELQMTQSPSSLSASVGDRVTITCRASQDISIRLNWYQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVACLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDNTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2011-10-21
Deposition Author(s): Cockburn, J.J.B. , Navarro-Sanchez, M.E. , Rey, F.A. , Stura, E.A.