3RDT
Crystal structure of 809.b5 tcr complexed with mhc class ii i-ab/3k peptide
PDB DOI: 10.2210/pdb3rdt/pdb
Classification: IMMUNE SYSTEM Organism(s): Mus Musculus , Synthetic Construct
Deposited: 2011-04-01 Deposition Author(s): Huseby, E.S. , Stern, L.J. , Trenh, P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Crystal structure of 809.b5 tcr complexed with mhc class ii i-ab/3k peptide
Huseby, E.S. , Stern, L.J. , Trenh, P.
Primary Citation of Related Structures: 3RDT
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| H-2 class II histocompatibility antigen, A-B alpha chain | C | 182 | Mus Musculus , Synthetic Construct | IEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQNIAVVKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPE |
| 3K peptide, linker and MHC H-2 class II I-Ab beta chain | D | 217 | Mus Musculus , Synthetic Construct | FEAQKAKANKAVDGGGGSLVPRGSGGGGSERHFVYQFMGECYFTNGTQRIRYVTRYIYNREEYVRYDSDVGEHRAVTELGRPDAEYWNSQPEILERTRAELDTVCRHNYEGPETHTSLRRLEQPNVVISLSRTEALNHHNTLVCSVTDFYPAKIKVRWFRNGQEETVGVSSTQLIRNGDWTFQVLVMLEMTPRRGEVYTCHVEHPSLKSPITVEWRA |
| TCR 809.B5 alpha chain | A | 205 | Mus Musculus , Synthetic Construct | MQQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLIAIRSVSDKKEDGRFTIFFNKREKKLSLHITDSQPGDSATYFCAASKGADRLTFGKGTQLIIQPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS |
| TCR 809.B5 beta chain | B | 241 | Mus Musculus , Synthetic Construct | MAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDFWGDTLYFGAGTRLSVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-04-01 Deposition Author(s): Huseby, E.S. , Stern, L.J. , Trenh, P.