3R1H
Crystal structure of the class i ligase ribozyme-substrate preligation complex, c47u mutant, ca2+ bound
PDB DOI: 10.2210/pdb3r1h/pdb
Classification: RNA BINDING PROTEIN/RNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2011-03-10 Deposition Author(s): Bartel, D.P. , Shechner, D.M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.15 Å
Crystal structure of the class i ligase ribozyme-substrate preligation complex, c47u mutant, ca2+ bound
Primary Citation of Related Structures: 3R1H
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| U1 small nuclear ribonucleoprotein A | A | 98 | Homo Sapiens , Synthetic Construct | MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMK |
| U1 small nuclear ribonucleoprotein A | D | 98 | Homo Sapiens , Synthetic Construct | MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'-R(*UP*CP*CP*AP*GP*UP*A)-3' | b | 7 | NA | UCCAGUA |
| 5'-R(*UP*CP*CP*AP*GP*UP*A)-3' | e | 7 | NA | UCCAGUA |
| Class I ligase ribozyme | c | 130 | NA | GGAACACUAUACUACUGGAUAAUCAAAGACAAAUCUGCCCGAAGGGUUUGAGAACAUACCCAUUGCACUCCGGGUAUGCAGAGGUGGCAGCCUCCGGUGGGUUAAAACCCAACGUUCUCAACAAUAGUGA |
| Class I ligase ribozyme | f | 130 | NA | GGAACACUAUACUACUGGAUAAUCAAAGACAAAUCUGCCCGAAGGGUUUGAGAACAUACCCAUUGCACUCCGGGUAUGCAGAGGUGGCAGCCUCCGGUGGGUUAAAACCCAACGUUCUCAACAAUAGUGA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2011-03-10 Deposition Author(s): Bartel, D.P. , Shechner, D.M.