3PIE
Crystal structure of the 5'->3' exoribonuclease xrn1, e178q mutant
PDB DOI: 10.2210/pdb3pie/pdb
Classification: HYDROLASE Organism(s): Coxsackievirus A9
Deposited: 2010-11-06 Deposition Author(s): Chang, J.H. , Tong, L. , Xiang, S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.9 Å
Crystal structure of the 5'->3' exoribonuclease xrn1, e178q mutant
Chang, J.H. , Tong, L. , Xiang, S.
Primary Citation of Related Structures: 3PIE
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 5'->3' EXORIBONUCLEASE (Xrn1) | A | 1155 | Coxsackievirus A9 | MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH |
| 5'->3' EXORIBONUCLEASE (Xrn1) | B | 1155 | Coxsackievirus A9 | MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH |
| 5'->3' EXORIBONUCLEASE (Xrn1) | C | 1155 | Coxsackievirus A9 | MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH |
| 5'->3' EXORIBONUCLEASE (Xrn1) | D | 1155 | Coxsackievirus A9 | MGIPKFFHFISERWPQISQLIDGSQIPEFDNLYLDMNSILHNCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARRFRTAMDAEKALQKAIENGDELPKGEPFDSNAITPGTEFMAKLTENLKYFIHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLIILGLSTHDHHFCLLREEVTFGKRSSSVKTLETQNFFLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGAFPVLLQTFKEALQHMDGYINEQGKINLARFSIWLKYLSDFEYLNFEKKDIDVEWFNQQLENISLEGERKRTRMGKKLLMKQQKKLIGAVKPWLLKTVQRKVTSELQDADFEIFPLEDKELVRANLDFLKEFAFDLGLILAHSKSKDLYYFKLDLDSINXXXXXXXXXXXXXXXXXXXIYSERFVEWKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDVIKGIDQNIEFHKGQPFKPFQQLMAVLPERSKNLIPVVYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDEKKRNSFGTDLIFIFNPQVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKTLPLTAELAYNSSVVFNFPSKQQSMVLHIQDLYKENGISLSDLAKRHMGKIVYSRWPFLRESKLLSLITEETVYEGVKSGKLTKVIERKPQDFERKEFRELKMTLKSNYQRTKAILLDDISALAKVVPVNGLVRNSDGSYSKSFNETIEYYPLQLIVEDVKNKDERYIEKEPLPINKEFPKGSKVVFLGDYAYGGEATVDGYNSETRLKLTVKKGSLRAEPNIGKVRAKLDSQALRFYPTQVXXXXXXXXXXXXXXXXXXXSSAEADSILKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSDRQLVYHSKASLEHHHHHH |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2010-11-06 Deposition Author(s): Chang, J.H. , Tong, L. , Xiang, S.