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3NDH

Restriction endonuclease in complex with substrate dna

PDB DOI: 10.2210/pdb3ndh/pdb

Classification: HYDROLASE/DNA
Organism(s): Achromobacter Denitrificans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2010-06-07
Deposition Author(s): Bochtler, M. , Czapinska, H. , Firczuk, M. , Wojciechowski, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.3 Å

3ndh
Literature

Restriction endonuclease in complex with substrate dna

Bochtler, M. , Czapinska, H. , Firczuk, M. , Wojciechowski, M.

Primary Citation of Related Structures: 3NDH


Proteins
Molecule Chains Sequence Length Organism Sequence
restriction endonuclease THAI A 225 Achromobacter Denitrificans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGHHHHHHEFNIRDRMNDHLKDLFRDRLIIDKVQRRLPYMFQLAELESSRAGKVGMEVGSLRERIISSLLIYKFGEKNVETDLPITEPEIDVKLFGSPISIKTITGKEPAGVKLIWTVDATKARQFLETWHPRFDLILVHINWSSLGGVYYIPDYVQQRIFDEIGKDKYIKLPKQGTNPRGVEISNEALKEIMTDEETMSIKIEWKKTNVQYNAFKRWVDLWSEG
restriction endonuclease THAI B 225 Achromobacter Denitrificans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGHHHHHHEFNIRDRMNDHLKDLFRDRLIIDKVQRRLPYMFQLAELESSRAGKVGMEVGSLRERIISSLLIYKFGEKNVETDLPITEPEIDVKLFGSPISIKTITGKEPAGVKLIWTVDATKARQFLETWHPRFDLILVHINWSSLGGVYYIPDYVQQRIFDEIGKDKYIKLPKQGTNPRGVEISNEALKEIMTDEETMSIKIEWKKTNVQYNAFKRWVDLWSEG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*G*GP*TP*AP*CP*GP*CP*GP*AP*TP*G)-3') c 11 NA GGTACGCGATG
DNA (5'-D(*C*CP*AP*TP*CP*GP*CP*GP*TP*AP*C)-3') d 11 NA CCATCGCGTAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-06-07
Deposition Author(s): Bochtler, M. , Czapinska, H. , Firczuk, M. , Wojciechowski, M.