PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3MLS

Crystal structure of anti-hiv-1 v3 mab 2557 fab in complex with a hiv-1 gp120 v3 mimotope

PDB DOI: 10.2210/pdb3mls/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2010-04-18
Deposition Author(s): Kong, X.-P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.5 Å

3mls
Literature

Crystal structure of anti-hiv-1 v3 mab 2557 fab in complex with a hiv-1 gp120 v3 mimotope

Kong, X.-P.

Primary Citation of Related Structures: 3MLS


Proteins
Molecule Chains Sequence Length Organism Sequence
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab light chain L 219 Homo Sapiens , Synthetic Construct SYDLTQPPSVSVSPGQTASISCSGDKLDDKYVSWYYQRPGQSPVLLMYQDFKRPSGIPERLSGSKSGKTATLTISGTQSLDEGDYYCQAWDASTGVSGGGTKLTVLFGDGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab light chain M 219 Homo Sapiens , Synthetic Construct SYDLTQPPSVSVSPGQTASISCSGDKLDDKYVSWYYQRPGQSPVLLMYQDFKRPSGIPERLSGSKSGKTATLTISGTQSLDEGDYYCQAWDASTGVSGGGTKLTVLFGDGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab light chain N 219 Homo Sapiens , Synthetic Construct SYDLTQPPSVSVSPGQTASISCSGDKLDDKYVSWYYQRPGQSPVLLMYQDFKRPSGIPERLSGSKSGKTATLTISGTQSLDEGDYYCQAWDASTGVSGGGTKLTVLFGDGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab light chain O 219 Homo Sapiens , Synthetic Construct SYDLTQPPSVSVSPGQTASISCSGDKLDDKYVSWYYQRPGQSPVLLMYQDFKRPSGIPERLSGSKSGKTATLTISGTQSLDEGDYYCQAWDASTGVSGGGTKLTVLFGDGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab heavy chain H 226 Homo Sapiens , Synthetic Construct EVQLVESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab heavy chain I 226 Homo Sapiens , Synthetic Construct EVQLVESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab heavy chain J 226 Homo Sapiens , Synthetic Construct EVQLVESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab heavy chain K 226 Homo Sapiens , Synthetic Construct EVQLVESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
Rationally designed V3 mimotope P 20 Homo Sapiens , Synthetic Construct ACQAFYASSPRKSIHIGACA
Rationally designed V3 mimotope Q 20 Homo Sapiens , Synthetic Construct ACQAFYASSPRKSIHIGACA
Rationally designed V3 mimotope R 20 Homo Sapiens , Synthetic Construct ACQAFYASSPRKSIHIGACA
Rationally designed V3 mimotope S 20 Homo Sapiens , Synthetic Construct ACQAFYASSPRKSIHIGACA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2010-04-18
Deposition Author(s): Kong, X.-P.