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3KDE

Crystal structure of the thap domain from d. melanogaster p-element transposase in complex with its natural dna binding site

PDB DOI: 10.2210/pdb3kde/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Drosophila Melanogaster , Synthetic Construct

Deposited: 2009-10-22
Deposition Author(s): Berger, J.M. , Lyubimov, A.Y. , Rio, D.C. , Sabogal, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.74 Å

3kde
Literature

Crystal structure of the thap domain from d. melanogaster p-element transposase in complex with its natural dna binding site

Berger, J.M. , Lyubimov, A.Y. , Rio, D.C. , Sabogal, A.

Primary Citation of Related Structures: 3KDE


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*GP*TP*TP*AP*AP*GP*(BRU)P*GP*GP*A)-3' a 10 NA GTTAAGUGGA
5'-D(*(BRU)P*CP*CP*AP*CP*TP*TP*AP*AP*C)-3' b 10 NA UCCACTTAAC

Proteins
Molecule Chains Sequence Length Organism Sequence
Transposable element P transposase C 77 Drosophila Melanogaster , Synthetic Construct MKYCKFCCKAVTGVKLIHVPKCAIKRKLWEQSLGCSLGENSQICDTHFNDSQWKAAPAKGQTFKRRRLNADAVPSKV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-10-22
Deposition Author(s): Berger, J.M. , Lyubimov, A.Y. , Rio, D.C. , Sabogal, A.