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3JX7

Bacillus cereus alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog

PDB DOI: 10.2210/pdb3jx7/pdb

Classification: HYDROLASE/DNA
Organism(s): Vibrio Cholerae Serotype O1 (Strain Atcc 39541 / Classical Ogawa 395 / O395) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2009-09-18
Deposition Author(s): Eichman, B.F. , Rubinson, E.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.6 Å

3jx7
Literature

Bacillus cereus alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog

Eichman, B.F. , Rubinson, E.H.

Primary Citation of Related Structures: 3JX7


Proteins
Molecule Chains Sequence Length Organism Sequence
alkylpurine DNA glycosylase AlkD A 232 Vibrio Cholerae Serotype O1 (Strain Atcc 39541 / Classical Ogawa 395 / O395) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) PMHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKDIIQIHTLPDQKDFQIIIRELWDLPEREFQAAALDIMQKYKKHINETHIPFLEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQRAAILFQLKYKQKMDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPDVVWEYVQNNELAPLSKREAIKHIKQNYGINNEK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*GP*GP*AP*CP*TP*(DZM)P*AP*CP*GP*GP*G)-3') b 12 NA CGGACTAACGGG
DNA (5'-D(*CP*CP*CP*GP*TP*TP*AP*GP*TP*CP*CP*G)-3') c 12 NA CCCGTTAGTCCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-09-18
Deposition Author(s): Eichman, B.F. , Rubinson, E.H.