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FASTA Sequence PDB Format mmCIF Format
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3J1O

Cryo-em map of a yeast minimal preinitiation complex interacting with the mediator head module

PDB DOI: 10.2210/pdb3j1o/pdb

Classification: TRANSCRIPTION
Organism(s): Grouper Iridovirus

Deposited: 2012-03-29
Deposition Author(s): Asturias, F.J. , Imasaki, T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 16.0 Å

3j1o
Literature

Cryo-em map of a yeast minimal preinitiation complex interacting with the mediator head module

Asturias, F.J. , Imasaki, T.

Primary Citation of Related Structures: 3J1O


Proteins
Molecule Chains Sequence Length Organism Sequence
Mediator of RNA polymerase II transcription subunit 11 H 131 Grouper Iridovirus MQVLNTKSETKQENEGSQPPYIQERLKSLNDIETQLCSMLQEASQVTFIFGELKRGNESVKPQFENHVKQFYERLDKSTTQLRKEIQLLDENVGTRLLPINVNKKALGQDTEKMEEQLDLLSAILDPSKSK
Mediator of RNA polymerase II transcription subunit 17 I 484 Grouper Iridovirus QEQFVKRRRDMLEHINLAMNESSLALEFVSLLLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPYVAPTKKEYIELDILNKGWKLQSLNESKDLLRASFNKLSSILQNEHDYWNKIMQSISNKDVIFKIRDRTSGQKLLAIKYGYEDSGSTYKHDRGIANIRNNIESQNLDLIPHSSSVFKGTDFVHSVKKFLRVRIFTKIESEDDYILSGESVMDRDSESEEAETKDIRKQIQLLKKIIFEKELMYQIKKECALLISYGVSIENENKVIIELPNEKFEIELLSLDDDSIVNHEQDLPKINDKRANLMLVMLRLLLVVIFKKTLRSRISSPHGLINLNVDDDILIIRPILGKVRFANYKLLLKKIIKDYVLDIVPGSSITETEVEREQPQENKNIDDENITKLNKEIRAFDKLLNIPRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEDFLHFIVAEYIQQKKV
Mediator of RNA polymerase II transcription subunit 8 J 223 Grouper Iridovirus MSQSTASLVPEGNQGSLQEDVSFDFNGVPGQALDAVRMRLAQLTHSLRRIRDEMSKAELPQWYTLQSQLNVTLSQLVSVTSTLQHFQETLDSTVVYPLPKFPTTSHESLVTTLLRKKNIPEVDEWMKYVRETSGVTTALLKDEEIEKLLQQDREITNWARTTFRNEYGKHDFKNEESLSEEHASLLVRDSKPSKPFNVDDVLKFTFTGEKPIITGSTSTSSSN
Mediator of RNA polymerase II transcription subunit 22 K 121 Grouper Iridovirus MSNQALYEKLEQTRTILSVKLAELINMTTIADRNDDDEGSFAQENSELAVATTSVMMVNNQTMQLIKNVQDLLILTRSIKEKWLLNQIPVTEHSKVTRFDEKQIEELLDNCIETFVAEKTT
Mediator of RNA polymerase II transcription subunit 18 L 275 Grouper Iridovirus MVQQLSLFGSIGDDGYDLLISTLTTISGNPPLLYNSLCTVWKPNPSYDVENVNSRNQLVEPNRIKLSKEVPFSYLIDETMMDKPLNFRILKSFTNDKIPLNYAMTRNINSDDIIDVDMDASPAPSNESCSPWSLQISDIPAAGNNRSVSMQTIAETIILSSAGKNSSVSSLMNGLGYVFEFQYLTIGVKFFMKHGLILELQKIWQIEEAGNSQITSGGFLLKAYINVSRGTDIDRINYTETALMNLKKELQGYIELSVPDRQSMDSRVAHGNILI
Mediator of RNA polymerase II transcription subunit 20 M 210 Grouper Iridovirus MGKSAVIFVERATPATLTELKDALSNSILSVRDPWSIDFRTYRCSIKNLPADVSKLMYSITFHHHGRQTVLIKDNSAMVTTAAAADIPPALVFNGSSTGVPESIDTILSSKLSNIWMQRQLIKGDAGETLILDGLTVRLVNLFSSTGFKGLLIELQADEAGEFETKIAGIEGHLAEIRAKEYKTSSDSLGPDTSNEICDLAYQYVRALEL
Mediator of RNA polymerase II transcription subunit 6 N 25 Grouper Iridovirus IFKIVQSRLMSTSYHLNSTLESLYD
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2012-03-29
Deposition Author(s): Asturias, F.J. , Imasaki, T.