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3IDX
Crystal structure of hiv-gp120 core in complex with cd4-binding site antibody b13, space group c222
PDB DOI: 10.2210/pdb3idx/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2009-07-22 Deposition Author(s): Arthos, J. , Burton, D.R. , Cavacini, L. , Chen, L. , Dimitrov, D.S. , Hessell, A.J. , Kwon, Y.D. , Kwong, P.D. , Mascola, J.R. , Nabel, G.J. , O'Dell, S. , Pancera, M. , Posner, M. , Sodroski, J. , Tang, M. , Wu, X. , Wyatt, R. , Xu, L. , Yang, Z.Y. , Zhang, M.Y. , Zhou, T.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.5 Å
Crystal structure of hiv-gp120 core in complex with cd4-binding site antibody b13, space group c222
Arthos, J. , Burton, D.R. , Cavacini, L. , Chen, L. , Dimitrov, D.S. , Hessell, A.J. , Kwon, Y.D. , Kwong, P.D. , Mascola, J.R. , Nabel, G.J. , O'Dell, S. , Pancera, M. , Posner, M. , Sodroski, J. , Tang, M. , Wu, X. , Wyatt, R. , Xu, L. , Yang, Z.Y. , Zhang, M.Y. , Zhou, T.
Primary Citation of Related Structures: 3IDX
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HIV-1 HxBc2 gp120 core | G | 317 | Homo Sapiens , Human Immunodeficiency Virus 1 | EVVLVNVTENFNWCKNDMVEQMHEDICSLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSSQLLLNGSLAEEEVVIRSCNFTDNAKTIIVQLNTSVEINCTGAGHCNIARAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHWFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQIINMWCKVGKMMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE |
| Fab b13 heavy chain | H | 231 | Homo Sapiens , Human Immunodeficiency Virus 1 | QVQLVESGGGVVQPGRSLRLSCAASGFTFRNYAMHWVRQAPGKGLEWVALIKYDGRNKYYADSVKGRFSISRDNSKNTLYLEMNSLRAEDTAVYYCARDIGLKGEHYDILTAYGPDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC |
| Fab b13 light chain | L | 215 | Homo Sapiens , Human Immunodeficiency Virus 1 | DIQMTQSPSSLSASVGDRVTITCQASQDIRNYLNWYQQKPGKAPKLLIYDASNSETGVPSRFSGSGSGRDFTFTISSLQPEDVATYYCQQHQNVPLTTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2009-07-22 Deposition Author(s): Arthos, J. , Burton, D.R. , Cavacini, L. , Chen, L. , Dimitrov, D.S. , Hessell, A.J. , Kwon, Y.D. , Kwong, P.D. , Mascola, J.R. , Nabel, G.J. , O'Dell, S. , Pancera, M. , Posner, M. , Sodroski, J. , Tang, M. , Wu, X. , Wyatt, R. , Xu, L. , Yang, Z.Y. , Zhang, M.Y. , Zhou, T.