PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

3I8D

The pairing geometry of the hydrophobic thymine analog 2,4-difluorotoluene in duplex dna as analyzed by x-ray crystallography

PDB DOI: 10.2210/pdb3i8d/pdb

Classification: HYDROLASE/DNA
Organism(s): Bacillus Halodurans , Synthetic Construct

Deposited: 2009-07-09
Deposition Author(s): Egli, M. , Pallan, P.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.61 Å

3i8d
Literature

The pairing geometry of the hydrophobic thymine analog 2,4-difluorotoluene in duplex dna as analyzed by x-ray crystallography

Egli, M. , Pallan, P.S.

Primary Citation of Related Structures: 3I8D


Proteins
Molecule Chains Sequence Length Organism Sequence
Ribonuclease H A 132 Bacillus Halodurans , Synthetic Construct EIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADY
Ribonuclease H C 132 Bacillus Halodurans , Synthetic Construct EIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADY

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*GP*CP*GP*AP*AP*TP*(DFT)P*CP*GP*CP*G)-3' b 12 NA CGCGAATNCGCG
5'-D(*CP*GP*CP*GP*AP*AP*TP*(DFT)P*CP*GP*CP*G)-3' d 12 NA CGCGAATNCGCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-07-09
Deposition Author(s): Egli, M. , Pallan, P.S.