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3HW8

Ternary complex of dna polymerase lambda of a two nucleotide gapped dna substrate with a c in the scrunch site

PDB DOI: 10.2210/pdb3hw8/pdb

Classification: TRANSFERASE/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2009-06-17
Deposition Author(s): Bebenek, K. , Garcia-Diaz, M. , Havener, J.M. , Krahn, J.M. , Kunkel, T.A. , Larrea, A.A. , Pedersen, L.C. , Perera, L. , Ramsden, D.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å

3hw8
Literature

Ternary complex of dna polymerase lambda of a two nucleotide gapped dna substrate with a c in the scrunch site

Bebenek, K. , Garcia-Diaz, M. , Havener, J.M. , Krahn, J.M. , Kunkel, T.A. , Larrea, A.A. , Pedersen, L.C. , Perera, L. , Ramsden, D.A.

Primary Citation of Related Structures: 3HW8


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase lambda A 335 Homo Sapiens , Synthetic Construct MAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGAKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*CP*GP*GP*CP*CP*AP*AP*TP*AP*CP*TP*G)-3' b 12 NA CGGCCAATACTG
5'-D(*CP*AP*GP*TP*AP*T)-3' c 6 NA CAGTAT
5'-D(P*GP*CP*CP*G)-3' d 4 NA GCCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2009-06-17
Deposition Author(s): Bebenek, K. , Garcia-Diaz, M. , Havener, J.M. , Krahn, J.M. , Kunkel, T.A. , Larrea, A.A. , Pedersen, L.C. , Perera, L. , Ramsden, D.A.